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| | ==Crystal structure of falcipain-2 from Plasmodium falciparum== | | ==Crystal structure of falcipain-2 from Plasmodium falciparum== |
| - | <StructureSection load='2ghu' size='340' side='right' caption='[[2ghu]], [[Resolution|resolution]] 3.10Å' scene=''> | + | <StructureSection load='2ghu' size='340' side='right'caption='[[2ghu]], [[Resolution|resolution]] 3.10Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2ghu]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Plafa Plafa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GHU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GHU FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2ghu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GHU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GHU FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ghu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ghu OCA], [http://pdbe.org/2ghu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ghu RCSB], [http://www.ebi.ac.uk/pdbsum/2ghu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ghu ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1Å</td></tr> |
| | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ghu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ghu OCA], [https://pdbe.org/2ghu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ghu RCSB], [https://www.ebi.ac.uk/pdbsum/2ghu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ghu ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q9N6S8_PLAFA Q9N6S8_PLAFA] |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Plafa]] | + | [[Category: Large Structures]] |
| - | [[Category: Hilgenfeld, R]] | + | [[Category: Plasmodium falciparum]] |
| - | [[Category: Hogg, T]] | + | [[Category: Hilgenfeld R]] |
| - | [[Category: Nagarajan, K]] | + | [[Category: Hogg T]] |
| - | [[Category: Schmidt, C L]] | + | [[Category: Nagarajan K]] |
| - | [[Category: Alpha helix]]
| + | [[Category: Schmidt CL]] |
| - | [[Category: Hydrolase]]
| + | |
| - | [[Category: L-domain]]
| + | |
| - | [[Category: Papain-like cysteine protease]]
| + | |
| - | [[Category: R-domain]]
| + | |
| - | [[Category: Random coil]]
| + | |
| - | [[Category: Twisted antiparallel beta-sheet]]
| + | |
| Structural highlights
Function
Q9N6S8_PLAFA
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Malaria is caused by protozoan erythrocytic parasites of the Plasmodium genus, with Plasmodium falciparum being the most dangerous and widespread disease-causing species. Falcipain-2 (FP-2) of P. falciparum is a papain-family (C1A) cysteine protease that plays an important role in the parasite life cycle by degrading erythrocyte proteins, most notably hemoglobin. Inhibition of FP-2 and its paralogues prevents parasite maturation, suggesting these proteins may be valuable targets for the design of novel antimalarial drugs, but lack of structural knowledge has impeded progress toward the rational discovery of potent, selective, and efficacious inhibitors. As a first step toward this goal, we present here the crystal structure of mature FP-2 at 3.1 A resolution, revealing novel structural features of the FP-2 subfamily proteases including a dynamic beta-hairpin hemoglobin binding motif, a flexible N-terminal alpha-helical extension, and a unique active-site cleft. We also demonstrate by biochemical methods that mature FP-2 can proteolytically process its own precursor in trans at neutral to weakly alkaline pH, that the binding of hemoglobin to FP-2 is strictly pH-dependent, and that FP-2 preferentially binds methemoglobin over hemoglobin. Because the specificity and proteolytic activity of FP-2 toward its multiple targets appears to be pH-dependent, we suggest that environmental pH may play an important role in orchestrating FP-2 function over the different life stages of the parasite. Moreover, it appears that selectivity of FP-2 for methemoglobin may represent an evolutionary adaptation to oxidative stress conditions within the host cell.
Structural and functional characterization of Falcipain-2, a hemoglobinase from the malarial parasite Plasmodium falciparum.,Hogg T, Nagarajan K, Herzberg S, Chen L, Shen X, Jiang H, Wecke M, Blohmke C, Hilgenfeld R, Schmidt CL J Biol Chem. 2006 Sep 1;281(35):25425-37. Epub 2006 Jun 15. PMID:16777845[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hogg T, Nagarajan K, Herzberg S, Chen L, Shen X, Jiang H, Wecke M, Blohmke C, Hilgenfeld R, Schmidt CL. Structural and functional characterization of Falcipain-2, a hemoglobinase from the malarial parasite Plasmodium falciparum. J Biol Chem. 2006 Sep 1;281(35):25425-37. Epub 2006 Jun 15. PMID:16777845 doi:10.1074/jbc.M603776200
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