This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2i81

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:07, 30 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2i81.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Plasmodium vivax 2-Cys Peroxiredoxin, Reduced==
-
The line below this paragraph, containing "STRUCTURE_2i81", creates the "Structure Box" on the page.
+
<StructureSection load='2i81' size='340' side='right'caption='[[2i81]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2i81]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax_Sal-1 Plasmodium vivax Sal-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I81 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I81 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i81 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i81 OCA], [https://pdbe.org/2i81 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i81 RCSB], [https://www.ebi.ac.uk/pdbsum/2i81 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i81 ProSAT]</span></td></tr>
-
{{STRUCTURE_2i81| PDB=2i81 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A5K421_PLAVS A5K421_PLAVS]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i8/2i81_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i81 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Plasmodium vivax 2-Cys Peroxiredoxin, Reduced===
+
==See Also==
-
 
+
*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2I81 is a 5 chains structure of sequences from [http://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I81 OCA].
+
[[Category: Large Structures]]
-
[[Category: Plasmodium vivax]]
+
[[Category: Plasmodium vivax Sal-1]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Artz, J D.]]
+
[[Category: Artz JD]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev A]]
-
[[Category: Dong, A.]]
+
[[Category: Dong A]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Hui, R.]]
+
[[Category: Hui R]]
-
[[Category: Kozieradski, I.]]
+
[[Category: Kozieradski I]]
-
[[Category: Lew, J.]]
+
[[Category: Lew J]]
-
[[Category: Qiu, W.]]
+
[[Category: Qiu W]]
-
[[Category: Ren, H.]]
+
[[Category: Ren H]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Sundstrom M]]
-
[[Category: Sundstrom, M.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Zhao Y]]
-
[[Category: Zhao, Y.]]
+
-
[[Category: Peroxiredoxin]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomics consortium]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 04:22:20 2009''
+

Current revision

Crystal Structure of Plasmodium vivax 2-Cys Peroxiredoxin, Reduced

PDB ID 2i81

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2i81"
Personal tools