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2idf

From Proteopedia

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(New page: 200px {{Structure |PDB= 2idf |SIZE=350|CAPTION= <scene name='initialview01'>2idf</scene>, resolution 2.25&Aring; |SITE= <scene name='pdbsite=AC1:Cu+Binding+Site+F...)
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[[Image:2idf.jpg|left|200px]]
 
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{{Structure
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==P. aeruginosa azurin N42C/M64E double mutant, BMME-linked dimer==
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|PDB= 2idf |SIZE=350|CAPTION= <scene name='initialview01'>2idf</scene>, resolution 2.25&Aring;
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<StructureSection load='2idf' size='340' side='right'caption='[[2idf]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Cu+Binding+Site+For+Residue+A+129'>AC1</scene>, <scene name='pdbsite=AC2:Cu+Binding+Site+For+Residue+B+129'>AC2</scene>, <scene name='pdbsite=AC3:Ni+Binding+Site+For+Residue+A+301'>AC3</scene>, <scene name='pdbsite=AC4:Ni+Binding+Site+For+Residue+B+302'>AC4</scene>, <scene name='pdbsite=AC5:144+Binding+Site+For+Residue+A+203'>AC5</scene>, <scene name='pdbsite=AC6:144+Binding+Site+For+Residue+B+204'>AC6</scene> and <scene name='pdbsite=AC7:Opp+Binding+Site+For+Residue+A+205'>AC7</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=144:TRIS-HYDROXYMETHYL-METHYL-AMMONIUM'>144</scene> and <scene name='pdbligand=OPP:1-[PYRROL-1-YL-2,5-DIONE-METHOXYMETHYL]-PYRROLE-2,5-DIONE'>OPP</scene>
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<table><tr><td colspan='2'>[[2idf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IDF FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
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|GENE= azu ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=144:TRIS-HYDROXYMETHYL-METHYL-AMMONIUM'>144</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=OPP:1-[PYRROL-1-YL-2,5-DIONE-METHOXYMETHYL]-PYRROLE-2,5-DIONE'>OPP</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2idf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2idf OCA], [https://pdbe.org/2idf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2idf RCSB], [https://www.ebi.ac.uk/pdbsum/2idf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2idf ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AZUR_PSEAE AZUR_PSEAE] Transfers electrons from cytochrome c551 to cytochrome oxidase.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2idf_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2idf ConSurf].
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<div style="clear:both"></div>
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'''P. aeruginosa azurin N42C/M64E double mutant, BMME-linked dimer'''
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==See Also==
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*[[Azurin 3D structures|Azurin 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2IDF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IDF OCA].
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[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
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[[Category: Single protein]]
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[[Category: Canters GW]]
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[[Category: Canters, G W.]]
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[[Category: Cavazzini D]]
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[[Category: Cavazzini, D.]]
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[[Category: Einsle O]]
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[[Category: Einsle, O.]]
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[[Category: Hoffmann M]]
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[[Category: Hoffmann, M.]]
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[[Category: Rossi GL]]
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[[Category: Jongh, T E.de.]]
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[[Category: Ubbink M]]
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[[Category: Rossi, G L.]]
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[[Category: De Jongh TE]]
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[[Category: Ubbink, M.]]
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[[Category: 144]]
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[[Category: CU]]
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[[Category: NI]]
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[[Category: OPP]]
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[[Category: cupredoxin]]
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[[Category: electron transfer]]
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[[Category: electron transport]]
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[[Category: protein crosslinking]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:28:16 2008''
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Current revision

P. aeruginosa azurin N42C/M64E double mutant, BMME-linked dimer

PDB ID 2idf

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