This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2iot

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:14, 30 August 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2iot.png|left|200px]]
 
-
{{STRUCTURE_2iot| PDB=2iot | SCENE= }}
+
==Clavulanic Acid bound to Elastase==
-
 
+
<StructureSection load='2iot' size='340' side='right'caption='[[2iot]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===Clavulanic Acid bound to Elastase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2iot]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IOT FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL5:N-(3-OXOPROPYL)GLYCINE'>CL5</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[2iot]] is a 1 chain structure of [[Elastase]] with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOT OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iot OCA], [https://pdbe.org/2iot PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iot RCSB], [https://www.ebi.ac.uk/pdbsum/2iot PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iot ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CELA1_PIG CELA1_PIG] Acts upon elastin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/2iot_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iot ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Elastase|Elastase]]
+
*[[Aromatic amine dehydrogenase 3D structures|Aromatic amine dehydrogenase 3D structures]]
-
[[Category: Pancreatic elastase]]
+
*[[Elastase 3D structures|Elastase 3D structures]]
 +
*[[Thymidylate synthase 3D structures|Thymidylate synthase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Farady, C.]]
+
[[Category: Farady C]]
-
[[Category: Navia, M A.]]
+
[[Category: Navia MA]]
-
[[Category: Elastase clavulanic acid]]
+
-
[[Category: Hydrolase]]
+

Current revision

Clavulanic Acid bound to Elastase

PDB ID 2iot

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools