This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2oym
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='2oym' size='340' side='right'caption='[[2oym]], [[Resolution|resolution]] 1.86Å' scene=''> | <StructureSection load='2oym' size='340' side='right'caption='[[2oym]], [[Resolution|resolution]] 1.86Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2oym]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2oym]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OYM FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MNI:N-{[(2R,3R,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PYRROLIDIN-2-YL]METHYL}-4-(DIMETHYLAMINO)BENZAMIDE'>MNI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MNI:N-{[(2R,3R,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PYRROLIDIN-2-YL]METHYL}-4-(DIMETHYLAMINO)BENZAMIDE'>MNI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oym OCA], [https://pdbe.org/2oym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oym RCSB], [https://www.ebi.ac.uk/pdbsum/2oym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oym ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oym OCA], [https://pdbe.org/2oym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oym RCSB], [https://www.ebi.ac.uk/pdbsum/2oym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oym ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O33853_RHOSO O33853_RHOSO] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 20: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Endoglycosylceramidase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Rhodococcus sp]] |
| - | [[Category: Caines | + | [[Category: Caines MEC]] |
| - | [[Category: Strynadka | + | [[Category: Strynadka NCJ]] |
| - | + | ||
Current revision
Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex
| |||||||||||
