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2pig

From Proteopedia

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[[Image:2pig.gif|left|200px]]
 
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{{Structure
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==Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6==
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|PDB= 2pig |SIZE=350|CAPTION= <scene name='initialview01'>2pig</scene>, resolution 2.380&Aring;
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<StructureSection load='2pig' size='340' side='right'caption='[[2pig]], [[Resolution|resolution]] 2.38&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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<table><tr><td colspan='2'>[[2pig]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A Salmonella enterica subsp. enterica serovar Paratyphi A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PIG FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.38&#8491;</td></tr>
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|GENE= ydcK, SPA1259 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=54388 Salmonella paratyphi])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1044 LpxD]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pig OCA], [https://pdbe.org/2pig PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pig RCSB], [https://www.ebi.ac.uk/pdbsum/2pig PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pig ProSAT], [https://www.topsan.org/Proteins/NESGC/2pig TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pig OCA], [http://www.ebi.ac.uk/pdbsum/2pig PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pig RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0H2WQ05_SALPA A0A0H2WQ05_SALPA]
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'''Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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2PIG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_paratyphi Salmonella paratyphi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIG OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pig_consurf.spt"</scriptWhenChecked>
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[[Category: Salmonella paratyphi]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Single protein]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Acton, T B.]]
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</jmolCheckbox>
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[[Category: Benach, J.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pig ConSurf].
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[[Category: Chen, Y.]]
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<div style="clear:both"></div>
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[[Category: Conover, K.]]
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__TOC__
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[[Category: Ho, C K.]]
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</StructureSection>
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[[Category: Hunt, J F.]]
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[[Category: Large Structures]]
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[[Category: Janjua, H.]]
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[[Category: Salmonella enterica subsp. enterica serovar Paratyphi A]]
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[[Category: Ma, L-C.]]
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[[Category: Acton TB]]
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[[Category: Montelione, G T.]]
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[[Category: Benach J]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Chen Y]]
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[[Category: Seetharaman, J.]]
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[[Category: Conover K]]
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[[Category: Tong, L.]]
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[[Category: Ho CK]]
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[[Category: Vorobiev, S M.]]
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[[Category: Hunt JF]]
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[[Category: Xiao, R.]]
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[[Category: Janjua H]]
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[[Category: nesg]]
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[[Category: Ma L-C]]
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[[Category: northeast structural genomics consortium]]
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[[Category: Montelione GT]]
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[[Category: protein structure initiative]]
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[[Category: Seetharaman J]]
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[[Category: psi-2]]
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[[Category: Tong L]]
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[[Category: scr6]]
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[[Category: Vorobiev SM]]
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[[Category: structural genomic]]
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[[Category: Xiao R]]
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[[Category: ydck]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:39:50 2008''
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Current revision

Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6

PDB ID 2pig

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