This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2plu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:04, 30 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2plu.gif|left|200px]]
 
-
<!--
+
==Crystal structure of Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_4120==
-
The line below this paragraph, containing "STRUCTURE_2plu", creates the "Structure Box" on the page.
+
<StructureSection load='2plu' size='340' side='right'caption='[[2plu]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2plu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PLU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PLU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2plu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2plu OCA], [https://pdbe.org/2plu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2plu RCSB], [https://www.ebi.ac.uk/pdbsum/2plu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2plu ProSAT]</span></td></tr>
-
{{STRUCTURE_2plu| PDB=2plu | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Crystal structure of Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_4120'''
+
[https://www.uniprot.org/uniprot/A3FQA7_CRYPI A3FQA7_CRYPI] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.[RuleBase:RU004223]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2PLU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Cryptosporidium_parvum_iowa_ii Cryptosporidium parvum iowa ii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PLU OCA].
+
<jmolCheckbox>
-
[[Category: Cryptosporidium parvum iowa ii]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pl/2plu_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Arrowsmith, C H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Artz, J D.]]
+
</jmolCheckbox>
-
[[Category: Bochkarev, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2plu ConSurf].
-
[[Category: Edwards, A M.]]
+
<div style="clear:both"></div>
-
[[Category: Hassanali, A.]]
+
__TOC__
-
[[Category: Hills, T.]]
+
</StructureSection>
-
[[Category: Hui, R.]]
+
[[Category: Cryptosporidium parvum Iowa II]]
-
[[Category: Kozieradzki, I.]]
+
[[Category: Large Structures]]
-
[[Category: Lew, J.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Lin, Y H.]]
+
[[Category: Artz JD]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Bochkarev A]]
-
[[Category: Schapira, M.]]
+
[[Category: Edwards AM]]
-
[[Category: Sundstrom, M.]]
+
[[Category: Hassanali A]]
-
[[Category: Weigelt, J.]]
+
[[Category: Hills T]]
-
[[Category: Wernimont, A K.]]
+
[[Category: Hui R]]
-
[[Category: Xiao, T.]]
+
[[Category: Kozieradzki I]]
-
[[Category: Zhao, Y.]]
+
[[Category: Lew J]]
-
[[Category: Cryptosporidium]]
+
[[Category: Lin YH]]
-
[[Category: Cyclophilin]]
+
[[Category: Schapira M]]
-
[[Category: Malaria]]
+
[[Category: Sundstrom M]]
-
[[Category: Sgc]]
+
[[Category: Weigelt J]]
-
[[Category: Structural genomic]]
+
[[Category: Wernimont AK]]
-
[[Category: Structural genomics consortium]]
+
[[Category: Xiao T]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 13:23:11 2008''
+
[[Category: Zhao Y]]

Current revision

Crystal structure of Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_4120

PDB ID 2plu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2plu"
Personal tools