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2q0o

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Current revision (11:15, 30 August 2023) (edit) (undo)
 
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<StructureSection load='2q0o' size='340' side='right'caption='[[2q0o]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2q0o' size='340' side='right'caption='[[2q0o]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2q0o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ensifer_fredii_ngr234 Ensifer fredii ngr234]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q0O FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2q0o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinorhizobium_fredii_NGR234 Sinorhizobium fredii NGR234]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q0O FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LAE:3-OXO-OCTANOIC+ACID+(2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE'>LAE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">traR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Ensifer fredii NGR234]), traM ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=394 Ensifer fredii NGR234])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LAE:3-OXO-OCTANOIC+ACID+(2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE'>LAE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q0o OCA], [https://pdbe.org/2q0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q0o RCSB], [https://www.ebi.ac.uk/pdbsum/2q0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q0o ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q0o OCA], [https://pdbe.org/2q0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q0o RCSB], [https://www.ebi.ac.uk/pdbsum/2q0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q0o ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/TRAR_RHISN TRAR_RHISN]] Positive regulation of conjugal transfer. TraR activates target genes in the presence of AAI and also activates traR and traI themselves (By similarity). [[https://www.uniprot.org/uniprot/TRAM_RHISN TRAM_RHISN]] Acts to antagonize TraR-dependent activation (Potential).
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[https://www.uniprot.org/uniprot/TRAR_SINFN TRAR_SINFN] Positive regulation of conjugal transfer. TraR activates target genes in the presence of AAI and also activates traR and traI themselves (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ensifer fredii ngr234]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chen, G]]
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[[Category: Sinorhizobium fredii NGR234]]
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[[Category: Chen, L]]
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[[Category: Chen G]]
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[[Category: Fuqua, C]]
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[[Category: Chen L]]
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[[Category: Jeffrey, P D]]
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[[Category: Fuqua C]]
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[[Category: Shi, Y]]
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[[Category: Jeffrey PD]]
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[[Category: Helix-turn-helix]]
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[[Category: Shi Y]]
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[[Category: Transcription]]
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[[Category: Two-helix coiled coil]]
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Current revision

Crystal structure of an anti-activation complex in bacterial quorum sensing

PDB ID 2q0o

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