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2q8w
From Proteopedia
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==Crystal structure of PAP-S1aci, a pokeweed antiviral protein from seeds of Phytolacca acinosa== | ==Crystal structure of PAP-S1aci, a pokeweed antiviral protein from seeds of Phytolacca acinosa== | ||
| - | <StructureSection load='2q8w' size='340' side='right' caption='[[2q8w]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='2q8w' size='340' side='right'caption='[[2q8w]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2q8w]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2q8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phytolacca_acinosa Phytolacca acinosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q8W FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q8w OCA], [https://pdbe.org/2q8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q8w RCSB], [https://www.ebi.ac.uk/pdbsum/2q8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q8w ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/D0VWY1_PHYAN D0VWY1_PHYAN] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q8/2q8w_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q8/2q8w_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2q8w ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Phytolacca acinosa]] | [[Category: Phytolacca acinosa]] | ||
| - | + | [[Category: Hilgenfeld R]] | |
| - | [[Category: Hilgenfeld | + | [[Category: Hogg T]] |
| - | [[Category: Hogg | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of PAP-S1aci, a pokeweed antiviral protein from seeds of Phytolacca acinosa
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