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2qj1
From Proteopedia
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| - | [[Image:2qj1.jpg|left|200px]] | ||
| - | + | ==Crystal structure of infectious bursal disease virus VP1 polymerase incubated with an oligopeptide mimicking the VP3 C-terminus== | |
| - | + | <StructureSection load='2qj1' size='340' side='right'caption='[[2qj1]], [[Resolution|resolution]] 3.48Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2qj1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Infectious_bursal_disease_virus Infectious bursal disease virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QJ1 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.48Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qj1 OCA], [https://pdbe.org/2qj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qj1 RCSB], [https://www.ebi.ac.uk/pdbsum/2qj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qj1 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/RDRP_IBDV RDRP_IBDV] RNA-dependent RNA polymerase which is found both free and covalently attached to the genomic RNA. May also contain guanylyl and methyl transferase activities (By similarity). | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qj/2qj1_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [ | + | </jmolCheckbox> |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qj1 ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | [ | + | __TOC__ |
| - | [[ | + | </StructureSection> |
| - | [ | + | |
| - | [[ | + | |
| - | + | ||
[[Category: Infectious bursal disease virus]] | [[Category: Infectious bursal disease virus]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Abaitua F]] |
| - | [[Category: | + | [[Category: Garriga D]] |
| - | [[Category: | + | [[Category: Navarro A]] |
| - | + | [[Category: Querol-Audi J]] | |
| + | [[Category: Rodriguez JF]] | ||
| + | [[Category: Verdaguer N]] | ||
Current revision
Crystal structure of infectious bursal disease virus VP1 polymerase incubated with an oligopeptide mimicking the VP3 C-terminus
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