This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qli

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:35, 30 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qli.jpg|left|200px]]
 
-
<!--
+
==mPlum E16Q mutant==
-
The line below this paragraph, containing "STRUCTURE_2qli", creates the "Structure Box" on the page.
+
<StructureSection load='2qli' size='340' side='right'caption='[[2qli]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qli]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Discosoma_sp._LW-2004 Discosoma sp. LW-2004]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QLI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
-
{{STRUCTURE_2qli| PDB=2qli | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qli FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qli OCA], [https://pdbe.org/2qli PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qli RCSB], [https://www.ebi.ac.uk/pdbsum/2qli PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qli ProSAT]</span></td></tr>
-
 
+
</table>
-
===mPlum E16Q mutant===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5S3G7_9CNID Q5S3G7_9CNID]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2QLI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Eukaryota Eukaryota]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLI OCA].
+
Check<jmol>
-
[[Category: Eukaryota]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2qli_consurf.spt"</scriptWhenChecked>
-
[[Category: Remington, S J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Shu, X.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Acylimine]]
+
</jmolCheckbox>
-
[[Category: Far-red fluorescent protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qli ConSurf].
-
 
+
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 11:35:00 2008''
+
__TOC__
 +
</StructureSection>
 +
[[Category: Discosoma sp. LW-2004]]
 +
[[Category: Large Structures]]
 +
[[Category: Remington SJ]]
 +
[[Category: Shu X]]

Current revision

mPlum E16Q mutant

PDB ID 2qli

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qli"
Personal tools