This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2r9g
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium== | ==Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium== | ||
| - | <StructureSection load='2r9g' size='340' side='right' caption='[[2r9g]], [[Resolution|resolution]] 2.09Å' scene=''> | + | <StructureSection load='2r9g' size='340' side='right'caption='[[2r9g]], [[Resolution|resolution]] 2.09Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2r9g]] is a 16 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2r9g]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecium_DO Enterococcus faecium DO]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R9G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R9G FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| - | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r9g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r9g OCA], [https://pdbe.org/2r9g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r9g RCSB], [https://www.ebi.ac.uk/pdbsum/2r9g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r9g ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r9g TOPSAN]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 12: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r9/2r9g_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r9/2r9g_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r9g ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Enterococcus faecium | + | [[Category: Enterococcus faecium DO]] |
| - | [[Category: Almo | + | [[Category: Large Structures]] |
| - | [[Category: Bonanno | + | [[Category: Almo SC]] |
| - | [[Category: Burley | + | [[Category: Bonanno JB]] |
| - | [[Category: Gheyi | + | [[Category: Burley SK]] |
| - | [[Category: Groshong | + | [[Category: Gheyi T]] |
| - | [[Category: Meyer | + | [[Category: Groshong C]] |
| - | + | [[Category: Meyer AJ]] | |
| - | [[Category: Patskovsky | + | [[Category: Patskovsky Y]] |
| - | [[Category: Ramagopal | + | [[Category: Ramagopal UA]] |
| - | [[Category: Rutter | + | [[Category: Rutter M]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Shi | + | [[Category: Shi W]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
| - | [[Category: Wu | + | [[Category: Wu B]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium
| |||||||||||
Categories: Enterococcus faecium DO | Large Structures | Almo SC | Bonanno JB | Burley SK | Gheyi T | Groshong C | Meyer AJ | Patskovsky Y | Ramagopal UA | Rutter M | Sauder JM | Shi W | Toro R | Wu B
