This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3bge
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae== | ==Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae== | ||
| - | <StructureSection load='3bge' size='340' side='right' caption='[[3bge]], [[Resolution|resolution]] 1.85Å' scene=''> | + | <StructureSection load='3bge' size='340' side='right'caption='[[3bge]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3bge]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3bge]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_86-028NP Haemophilus influenzae 86-028NP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BGE FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bge OCA], [https://pdbe.org/3bge PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bge RCSB], [https://www.ebi.ac.uk/pdbsum/3bge PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bge ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bge TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q4QL22_HAEI8 Q4QL22_HAEI8] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bge_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bge_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bge ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Haemophilus influenzae 86- | + | [[Category: Haemophilus influenzae 86-028NP]] |
| - | [[Category: Adams | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Adams J]] |
| - | [[Category: Bonanno | + | [[Category: Almo SC]] |
| - | [[Category: Burley | + | [[Category: Bonanno JB]] |
| - | [[Category: Freeman | + | [[Category: Burley SK]] |
| - | [[Category: Gheyi | + | [[Category: Freeman J]] |
| - | [[Category: Koss | + | [[Category: Gheyi T]] |
| - | [[Category: Maletic | + | [[Category: Koss J]] |
| - | [[Category: Meyer | + | [[Category: Maletic M]] |
| - | + | [[Category: Meyer AJ]] | |
| - | [[Category: Patskovsky | + | [[Category: Patskovsky Y]] |
| - | [[Category: Ramagopal | + | [[Category: Ramagopal UA]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae
| |||||||||||
Categories: Haemophilus influenzae 86-028NP | Large Structures | Adams J | Almo SC | Bonanno JB | Burley SK | Freeman J | Gheyi T | Koss J | Maletic M | Meyer AJ | Patskovsky Y | Ramagopal UA | Sauder JM | Toro R

