3bgg

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(New page: 200px<br /><applet load="3bgg" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bgg, resolution 1.93&Aring;" /> '''Crystal structure of...)
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[[Image:3bgg.jpg|left|200px]]<br /><applet load="3bgg" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="3bgg, resolution 1.93&Aring;" />
 
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'''Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP'''<br />
 
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==About this Structure==
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==Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP==
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3BGG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=BMP:'>BMP</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGG OCA].
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<StructureSection load='3bgg' size='340' side='right'caption='[[3bgg]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
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[[Category: Homo sapiens]]
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== Structural highlights ==
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[[Category: Orotidine-5'-phosphate decarboxylase]]
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<table><tr><td colspan='2'>[[3bgg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BGG FirstGlance]. <br>
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[[Category: Single protein]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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[[Category: Kotra, L.P.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMP:6-HYDROXYURIDINE-5-PHOSPHATE'>BMP</scene></td></tr>
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[[Category: Liu, Y.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bgg OCA], [https://pdbe.org/3bgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bgg RCSB], [https://www.ebi.ac.uk/pdbsum/3bgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bgg ProSAT]</span></td></tr>
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[[Category: Pai, E.F.]]
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</table>
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[[Category: Tang, H.L.]]
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== Disease ==
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[[Category: Wang, X.Y.]]
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[https://www.uniprot.org/uniprot/UMPS_HUMAN UMPS_HUMAN] Defects in UMPS are the cause of orotic aciduria type 1 (ORAC1) [MIM:[https://omim.org/entry/258900 258900]. A disorder of pyrimidine metabolism resulting in megaloblastic anemia and orotic acid crystalluria that is frequently associated with some degree of physical and mental retardation. A minority of cases have additional features, particularly congenital malformations and immune deficiencies.<ref>PMID:9042911</ref>
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[[Category: BMP]]
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== Function ==
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[[Category: alternative splicing]]
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[https://www.uniprot.org/uniprot/UMPS_HUMAN UMPS_HUMAN]
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[[Category: bmp]]
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== Evolutionary Conservation ==
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[[Category: c-terminal domain]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: disease mutation]]
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Check<jmol>
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[[Category: glycosyltransferase]]
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<jmolCheckbox>
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[[Category: human]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bgg_consurf.spt"</scriptWhenChecked>
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[[Category: lyase]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: multifunctional enzyme]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: orotidine 5'-monophosphate decarboxylase]]
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</jmolCheckbox>
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[[Category: polymorphism]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bgg ConSurf].
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[[Category: pyrimidine biosynthesis]]
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<div style="clear:both"></div>
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[[Category: transferase]]
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[[Category: ump synthase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:48:11 2008''
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==See Also==
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*[[Uridine 5'-monophosphate synthase 3D structures|Uridine 5'-monophosphate synthase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Kotra LP]]
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[[Category: Liu Y]]
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[[Category: Pai EF]]
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[[Category: Tang HL]]
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[[Category: Wang XY]]

Current revision

Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP

PDB ID 3bgg

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