3cjk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:29, 30 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cjk.png|left|200px]]
 
-
<!--
+
==Crystal structure of the adduct HAH1-Cd(II)-MNK1.==
-
The line below this paragraph, containing "STRUCTURE_3cjk", creates the "Structure Box" on the page.
+
<StructureSection load='3cjk' size='340' side='right'caption='[[3cjk]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cjk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-
{{STRUCTURE_3cjk| PDB=3cjk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjk OCA], [https://pdbe.org/3cjk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjk RCSB], [https://www.ebi.ac.uk/pdbsum/3cjk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ATOX1_HUMAN ATOX1_HUMAN] Binds and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjk ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The homoeostasis of metal ions in cells is the result of the contribution of several cellular pathways that involve transient, often weak, protein-protein interactions. Metal transfer typically implies the formation of adducts where the metal itself acts as a bridge between proteins, by co-ordinating residues of both interacting partners. In the present study we address the interaction between the human copper(I)-chaperone HAH1 (human ATX1 homologue) and a metal-binding domain in one of its partners, namely the P-type copper-transporting ATPase, ATP7A (ATPase, Cu+ transporting, alpha polypeptide). The adduct was structurally characterized in solution, in the presence of copper(I), and through X-ray crystallography, upon replacing copper(I) with cadmium(II). Further insight was obtained through molecular modelling techniques and site-directed mutagenesis. It was found that the interaction involves a relatively small interface (less than 1000 A(2), 1 A=0.1 nm) with a low fraction of non-polar atoms. These observations provide a possible explanation for the low affinity of the two apoproteins. It appears that electrostatics is important in selecting which domain of the ATPase is able to form detectable amounts of the metal-mediated adduct with HAH1.
-
===Crystal structure of the adduct HAH1-Cd(II)-MNK1.===
+
Copper(I)-mediated protein-protein interactions result from suboptimal interaction surfaces.,Banci L, Bertini I, Calderone V, Della-Malva N, Felli IC, Neri S, Pavelkova A, Rosato A Biochem J. 2009 Jul 29;422(1):37-42. PMID:19453293<ref>PMID:19453293</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3cjk" style="background-color:#fffaf0;"></div>
-
==About this Structure==
+
==See Also==
-
3CJK is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJK OCA].
+
*[[ATPase 3D structures|ATPase 3D structures]]
-
[[Category: Copper-exporting ATPase]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Banci, L.]]
+
[[Category: Large Structures]]
-
[[Category: Bertini, I.]]
+
[[Category: Banci L]]
-
[[Category: Calderone, V.]]
+
[[Category: Bertini I]]
-
[[Category: Della-Malva, N.]]
+
[[Category: Calderone V]]
-
[[Category: Felli, I.]]
+
[[Category: Della-Malva N]]
-
[[Category: Pavelkova, A.]]
+
[[Category: Felli I]]
-
[[Category: Rosato, A.]]
+
[[Category: Pavelkova A]]
-
[[Category: Alternative splicing]]
+
[[Category: Rosato A]]
-
[[Category: Atp-binding]]
+
-
[[Category: Atp7a]]
+
-
[[Category: Atp7b]]
+
-
[[Category: Chaperone]]
+
-
[[Category: Copper]]
+
-
[[Category: Copper transport]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Disease mutation]]
+
-
[[Category: Endoplasmic reticulum]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Golgi apparatus]]
+
-
[[Category: Hah1]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Membrane]]
+
-
[[Category: Menkes disease]]
+
-
[[Category: Metal homeostasis]]
+
-
[[Category: Metal transport/hydrolase complex]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Polymorphism]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 12 20:10:41 2009''
+

Current revision

Crystal structure of the adduct HAH1-Cd(II)-MNK1.

PDB ID 3cjk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools