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3d2x
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==Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate== | ==Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate== | ||
| - | <StructureSection load='3d2x' size='340' side='right' caption='[[3d2x]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='3d2x' size='340' side='right'caption='[[3d2x]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3d2x]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3d2x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D2X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D2X FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=D2X:3-[(4-HYDROXY-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM'>D2X</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D2X:3-[(4-HYDROXY-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM'>D2X</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d2x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d2x OCA], [https://pdbe.org/3d2x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d2x RCSB], [https://www.ebi.ac.uk/pdbsum/3d2x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d2x ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3d2x" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Riboswitch|Riboswitch]] | + | *[[Riboswitch 3D structures|Riboswitch 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Ban N]] |
| - | [[Category: | + | [[Category: Frick C]] |
| - | [[Category: | + | [[Category: Thore S]] |
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Current revision
Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate
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