This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jw1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:35, 30 August 2023) (edit) (undo)
 
Line 1: Line 1:
==Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy==
==Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy==
-
<StructureSection load='2jw1' size='340' side='right'caption='[[2jw1]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
+
<StructureSection load='2jw1' size='340' side='right'caption='[[2jw1]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2jw1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JW1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2jw1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JW1 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mxiM ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jw1 OCA], [https://pdbe.org/2jw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jw1 RCSB], [https://www.ebi.ac.uk/pdbsum/2jw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jw1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jw1 OCA], [https://pdbe.org/2jw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jw1 RCSB], [https://www.ebi.ac.uk/pdbsum/2jw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jw1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/MXIM_SHIFL MXIM_SHIFL]] Involved in the secretion of the Ipa antigens. [[https://www.uniprot.org/uniprot/MXID_SHIFL MXID_SHIFL]] Necessary for the secretion of IPA invasins.
+
[https://www.uniprot.org/uniprot/SCTG_SHIFL SCTG_SHIFL] Involved in the synthesis of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells (PubMed:10085046, PubMed:11717255). Pilot protein that is required for the proper localization of the secretin MxiD/SctC in the outer membrane (PubMed:11717255). Also influences both MxiD/SctC multimerization and stability (PubMed:11717255). Required for both Ipa translocation and tissue culture cell invasion (PubMed:10085046). Binds lipids (PubMed:15775974).<ref>PMID:10085046</ref> <ref>PMID:11717255</ref> <ref>PMID:15775974</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Shigella paradysenteriae weldin 1927]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Creagh, L]]
+
[[Category: Shigella flexneri]]
-
[[Category: Jung, Y M.T]]
+
[[Category: Synthetic construct]]
-
[[Category: Lario, P I]]
+
[[Category: Creagh L]]
-
[[Category: Maurelli, A T]]
+
[[Category: Jung YMT]]
-
[[Category: McIntosh, L P]]
+
[[Category: Lario PI]]
-
[[Category: Okon, M S]]
+
[[Category: Maurelli AT]]
-
[[Category: Strynadka, N C.J]]
+
[[Category: McIntosh LP]]
-
[[Category: Lipoprotein]]
+
[[Category: Okon MS]]
-
[[Category: Membrane]]
+
[[Category: Strynadka NCJ]]
-
[[Category: Membrane protein]]
+
-
[[Category: Outer membrane]]
+
-
[[Category: Palmitate]]
+
-
[[Category: Plasmid]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Protein-protein interaction]]
+
-
[[Category: Transport]]
+
-
[[Category: Virulence]]
+

Current revision

Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy

PDB ID 2jw1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools