This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5id8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:46, 30 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5id8' size='340' side='right'caption='[[5id8]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
<StructureSection load='5id8' size='340' side='right'caption='[[5id8]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5id8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Crassostrea_gigas Crassostrea gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ID8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ID8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5id8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Crassostrea_gigas Crassostrea gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ID8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ID8 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ida|5ida]], [[5idb|5idb]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYA:N-ACETYLALANINE'>AYA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5id8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5id8 OCA], [http://pdbe.org/5id8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5id8 RCSB], [http://www.ebi.ac.uk/pdbsum/5id8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5id8 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5id8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5id8 OCA], [https://pdbe.org/5id8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5id8 RCSB], [https://www.ebi.ac.uk/pdbsum/5id8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5id8 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/K1QRB6_CRAGI K1QRB6_CRAGI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 25:
[[Category: Crassostrea gigas]]
[[Category: Crassostrea gigas]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Unno, H]]
+
[[Category: Unno H]]
-
[[Category: Cgl1]]
+
-
[[Category: Crassostrea giga]]
+
-
[[Category: Lectin]]
+
-
[[Category: N-type]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of CGL1 from Crassostrea gigas, ligand free form (CGL1/FREE)

PDB ID 5id8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools