This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5igv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:52, 30 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Macrolide 2'-phosphotransferase type II - complex with GDP and azithromycin==
==Macrolide 2'-phosphotransferase type II - complex with GDP and azithromycin==
-
<StructureSection load='5igv' size='340' side='right' caption='[[5igv]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='5igv' size='340' side='right'caption='[[5igv]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5igv]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IGV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5igv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IGV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZIT:AZITHROMYCIN'>ZIT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5igu|5igu]], [[5igw|5igw]], [[5igy|5igy]], [[5igz|5igz]], [[5ih0|5ih0]], [[5ih1|5ih1]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZIT:AZITHROMYCIN'>ZIT</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5igv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5igv OCA], [http://pdbe.org/5igv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5igv RCSB], [http://www.ebi.ac.uk/pdbsum/5igv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5igv ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5igv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5igv OCA], [https://pdbe.org/5igv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5igv RCSB], [https://www.ebi.ac.uk/pdbsum/5igv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5igv ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O32553_ECOLX O32553_ECOLX]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 5igv" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5igv" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Berghuis, A M]]
+
[[Category: Escherichia coli]]
-
[[Category: Fong, D H]]
+
[[Category: Large Structures]]
-
[[Category: Kinase]]
+
[[Category: Berghuis AM]]
-
[[Category: Macrolide phosphotransferase]]
+
[[Category: Fong DH]]
-
[[Category: Transferase]]
+

Current revision

Macrolide 2'-phosphotransferase type II - complex with GDP and azithromycin

PDB ID 5igv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5igv"
Personal tools