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| <StructureSection load='3f3d' size='340' side='right'caption='[[3f3d]], [[Resolution|resolution]] 2.30Å' scene=''> | | <StructureSection load='3f3d' size='340' side='right'caption='[[3f3d]], [[Resolution|resolution]] 2.30Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3f3d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F3D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F3D FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3f3d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F3D FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=MET:METHIONINE'>MET</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2a65|2a65]], [[2qei|2qei]], [[3f3a|3f3a]], [[3f3c|3f3c]], [[3f3e|3f3e]], [[3f48|3f48]], [[3f4i|3f4i]], [[3f4j|3f4j]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=MET:METHIONINE'>MET</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">snf, aq_2077 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 "Aquifex aeolicus" Huber and Stetter 2001])</td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f3d OCA], [https://pdbe.org/3f3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f3d RCSB], [https://www.ebi.ac.uk/pdbsum/3f3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f3d ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f3d OCA], [http://pdbe.org/3f3d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f3d RCSB], [http://www.ebi.ac.uk/pdbsum/3f3d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f3d ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/O67854_AQUAE O67854_AQUAE] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| ==See Also== | | ==See Also== |
| *[[Leucine transporter|Leucine transporter]] | | *[[Leucine transporter|Leucine transporter]] |
- | *[[Symporter|Symporter]] | + | *[[Symporter 3D structures|Symporter 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Aquifex aeolicus huber and stetter 2001]] | + | [[Category: Aquifex aeolicus]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Gouaux, E]] | + | [[Category: Gouaux E]] |
- | [[Category: Piscitelli, C L]] | + | [[Category: Piscitelli CL]] |
- | [[Category: Singh, S K]] | + | [[Category: Singh SK]] |
- | [[Category: Yamashita, A]] | + | [[Category: Yamashita A]] |
- | [[Category: Nss]]
| + | |
- | [[Category: Slc6]]
| + | |
- | [[Category: Sodium-coupled]]
| + | |
- | [[Category: Symport]]
| + | |
- | [[Category: Transmembrane]]
| + | |
- | [[Category: Transport]]
| + | |
- | [[Category: Transport protein]]
| + | |
- | [[Category: Transporter]]
| + | |
| Structural highlights
Function
O67854_AQUAE
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Secondary transporters are workhorses of cellular membranes, catalyzing the movement of small molecules and ions across the bilayer and coupling substrate passage to ion gradients. However, the conformational changes that accompany substrate transport, the mechanism by which a substrate moves through the transporter, and principles of competitive inhibition remain unclear. We used crystallographic and functional studies on the leucine transporter (LeuT), a model for neurotransmitter sodium symporters, to show that various amino acid substrates induce the same occluded conformational state and that a competitive inhibitor, tryptophan (Trp), traps LeuT in an open-to-out conformation. In the Trp complex, the extracellular gate residues arginine 30 and aspartic acid 404 define a second weak binding site for substrates or inhibitors as they permeate from the extracellular solution to the primary substrate site, which demonstrates how residues that participate in gating also mediate permeation.
A competitive inhibitor traps LeuT in an open-to-out conformation.,Singh SK, Piscitelli CL, Yamashita A, Gouaux E Science. 2008 Dec 12;322(5908):1655-61. PMID:19074341[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Singh SK, Piscitelli CL, Yamashita A, Gouaux E. A competitive inhibitor traps LeuT in an open-to-out conformation. Science. 2008 Dec 12;322(5908):1655-61. PMID:19074341 doi:322/5908/1655
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