This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3f3z
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of Cryptosporidium parvum calcium dependent protein kinase cgd7_1840 in presence of indirubin E804== | ==Crystal structure of Cryptosporidium parvum calcium dependent protein kinase cgd7_1840 in presence of indirubin E804== | ||
| - | <StructureSection load='3f3z' size='340' side='right' caption='[[3f3z]], [[Resolution|resolution]] 1.84Å' scene=''> | + | <StructureSection load='3f3z' size='340' side='right'caption='[[3f3z]], [[Resolution|resolution]] 1.84Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3f3z]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3f3z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F3Z FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DRK:3-({[(3S)-3,4-DIHYDROXYBUTYL]OXY}AMINO)-1H,2H-2,3-BIINDOL-2-ONE'>DRK</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DRK:3-({[(3S)-3,4-DIHYDROXYBUTYL]OXY}AMINO)-1H,2H-2,3-BIINDOL-2-ONE'>DRK</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f3z OCA], [https://pdbe.org/3f3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f3z RCSB], [https://www.ebi.ac.uk/pdbsum/3f3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f3z ProSAT]</span></td></tr> | |
| - | + | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5CYL9_CRYPI Q5CYL9_CRYPI] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f3/3f3z_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f3/3f3z_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f3z ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 24: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Cryptosporidium parvum | + | [[Category: Cryptosporidium parvum Iowa II]] |
| - | [[Category: Amani | + | [[Category: Large Structures]] |
| - | [[Category: Arrowsmith | + | [[Category: Amani M]] |
| - | [[Category: Artz | + | [[Category: Arrowsmith CH]] |
| - | [[Category: Bochkarev | + | [[Category: Artz JD]] |
| - | [[Category: Cossar | + | [[Category: Bochkarev A]] |
| - | [[Category: Edwards | + | [[Category: Cossar D]] |
| - | [[Category: Hui | + | [[Category: Edwards AM]] |
| - | [[Category: Kozieradzki | + | [[Category: Hui R]] |
| - | [[Category: Lew | + | [[Category: Kozieradzki I]] |
| - | + | [[Category: Lew J]] | |
| - | [[Category: Sundstrom | + | [[Category: Sundstrom M]] |
| - | [[Category: Vedadi | + | [[Category: Vedadi M]] |
| - | [[Category: Wasney | + | [[Category: Wasney G]] |
| - | [[Category: Weigelt | + | [[Category: Weigelt J]] |
| - | [[Category: Wernimont | + | [[Category: Wernimont AK]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of Cryptosporidium parvum calcium dependent protein kinase cgd7_1840 in presence of indirubin E804
| |||||||||||
Categories: Cryptosporidium parvum Iowa II | Large Structures | Amani M | Arrowsmith CH | Artz JD | Bochkarev A | Cossar D | Edwards AM | Hui R | Kozieradzki I | Lew J | Sundstrom M | Vedadi M | Wasney G | Weigelt J | Wernimont AK
