This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g2n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:57, 6 September 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3g2n.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of N-acylglucosylamine with glycogen phosphorylase==
-
The line below this paragraph, containing "STRUCTURE_3g2n", creates the "Structure Box" on the page.
+
<StructureSection load='3g2n' size='340' side='right'caption='[[3g2n]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3g2n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G2N FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=OAK:N-(PHENYLCARBONYL)-BETA-D-GLUCOPYRANOSYLAMINE'>OAK</scene></td></tr>
-
{{STRUCTURE_3g2n| PDB=3g2n | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g2n OCA], [https://pdbe.org/3g2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g2n RCSB], [https://www.ebi.ac.uk/pdbsum/3g2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g2n ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PYGM_RABIT PYGM_RABIT] Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/3g2n_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g2n ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of N-acylglucosylamine with glycogen phosphorylase===
+
==See Also==
-
 
+
*[[Glycogen phosphorylase 3D structures|Glycogen phosphorylase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3G2N is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G2N OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15299833</ref><references group="xtra"/>
+
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
-
[[Category: Phosphorylase]]
+
[[Category: Alexacou K-M]]
-
[[Category: Alexacou, K M.]]
+
[[Category: Bokor E]]
-
[[Category: Bokor, E.]]
+
[[Category: Charavgi M-D]]
-
[[Category: Charavgi, M D.]]
+
[[Category: Chrysina ED]]
-
[[Category: Chrysina, E D.]]
+
[[Category: Leonidas DD]]
-
[[Category: Leonidas, D D.]]
+
[[Category: Oikonomakos GN]]
-
[[Category: Oikonomakos, G N.]]
+
[[Category: Oikonomakos NG]]
-
[[Category: Oikonomakos, N G.]]
+
[[Category: Somsak L]]
-
[[Category: Somsak, L.]]
+
[[Category: Zographos SE]]
-
[[Category: Zographos, S E.]]
+
-
[[Category: 3-triazole bioisosterism]]
+
-
[[Category: Acetylation]]
+
-
[[Category: Allosteric enzyme]]
+
-
[[Category: Amide-1]]
+
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Glycogen metabolism]]
+
-
[[Category: Glycogen phosphorylase]]
+
-
[[Category: Glycosyltransferase]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Pyridoxal phosphate]]
+
-
[[Category: Transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 17 10:43:25 2010''
+

Current revision

Crystal structure of N-acylglucosylamine with glycogen phosphorylase

PDB ID 3g2n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3g2n"
Personal tools