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3gr1

From Proteopedia

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Periplasmic domain of the T3SS inner membrane protein PrgH from S.typhimurium (fragment 170-392)

Structural highlights

3gr1 is a 8 chain structure with sequence from Salmonella enterica subsp. enterica serovar Typhimurium. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.8Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PRGH_SALTY Required for invasion of epithelial cells.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The type III secretion system (T3SS) is a macromolecular 'injectisome' that allows bacterial pathogens to transport virulence proteins into the eukaryotic host cell. This macromolecular complex is composed of connected ring-like structures that span both bacterial membranes. The crystal structures of the periplasmic domain of the outer membrane secretin EscC and the inner membrane protein PrgH reveal the conservation of a modular fold among the three proteins that form the outer membrane and inner membrane rings of the T3SS. This leads to the hypothesis that this conserved fold provides a common ring-building motif that allows for the assembly of the variably sized outer membrane and inner membrane rings characteristic of the T3SS. Using an integrated structural and experimental approach, we generated ring models for the periplasmic domain of EscC and placed them in the context of the assembled T3SS, providing evidence for direct interaction between the outer membrane and inner membrane ring components and an unprecedented span of the outer membrane secretin.

A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system.,Spreter T, Yip CK, Sanowar S, Andre I, Kimbrough TG, Vuckovic M, Pfuetzner RA, Deng W, Yu AC, Finlay BB, Baker D, Miller SI, Strynadka NC Nat Struct Mol Biol. 2009 May;16(5):468-76. Epub 2009 Apr 26. PMID:19396170^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Spreter T, Yip CK, Sanowar S, Andre I, Kimbrough TG, Vuckovic M, Pfuetzner RA, Deng W, Yu AC, Finlay BB, Baker D, Miller SI, Strynadka NC. A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system. Nat Struct Mol Biol. 2009 May;16(5):468-76. Epub 2009 Apr 26. PMID:19396170 doi:10.1038/nsmb.1603

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gr1"

@@ Line 1: / Line 1: @@
 ==Periplasmic domain of the T3SS inner membrane protein PrgH from S.typhimurium (fragment 170-392)==
-<StructureSection load='3gr1' size='340' side='right' caption='[[3gr1]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+<StructureSection load='3gr1' size='340' side='right'caption='[[3gr1]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3gr1]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GR1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GR1 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3gr1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GR1 FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gr0|3gr0]], [[3gr5|3gr5]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gr1 OCA], [http://pdbe.org/3gr1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gr1 RCSB], [http://www.ebi.ac.uk/pdbsum/3gr1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gr1 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gr1 OCA], [https://pdbe.org/3gr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gr1 RCSB], [https://www.ebi.ac.uk/pdbsum/3gr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gr1 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PRGH_SALTY PRGH_SALTY]] Required for invasion of epithelial cells.
+[https://www.uniprot.org/uniprot/PRGH_SALTY PRGH_SALTY] Required for invasion of epithelial cells.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
   <jmolCheckbox>
-    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3gr1_consurf.spt"</scriptWhenChecked>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3gr1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 32: / Line 32: @@
 __TOC__
 </StructureSection>
-[[Category: Strynadka, N C.J]]
+[[Category: Large Structures]]
-[[Category: Vockovic, M]]
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-[[Category: Yip, C K]]
+[[Category: Strynadka NCJ]]
-[[Category: Yu, A C]]
+[[Category: Vockovic M]]
-[[Category: Cell membrane]]
+[[Category: Yip CK]]
-[[Category: Inner membrane protein]]
+[[Category: Yu AC]]
-[[Category: Membrane]]
-[[Category: Membrane protein]]
-[[Category: Transmembrane]]
-[[Category: Type iii secretion system]]
-[[Category: Virulence]]

3gr1

From Proteopedia

Current revision

Periplasmic domain of the T3SS inner membrane protein PrgH from S.typhimurium (fragment 170-392)

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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