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3h8j

From Proteopedia

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{{Seed}}
 
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[[Image:3h8j.jpg|left|200px]]
 
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<!--
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==Native T4 RNase H in the absence of divalent metal ions==
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The line below this paragraph, containing "STRUCTURE_3h8j", creates the "Structure Box" on the page.
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<StructureSection load='3h8j' size='340' side='right'caption='[[3h8j]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3h8j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H8J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H8J FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_3h8j| PDB=3h8j | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h8j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h8j OCA], [https://pdbe.org/3h8j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h8j RCSB], [https://www.ebi.ac.uk/pdbsum/3h8j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h8j ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RNH_BPT4 RNH_BPT4] 5' to 3' exonuclease that removes the pentamer RNA primers from DNA chains initiated by the T4 primase-helicase.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h8/3h8j_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h8j ConSurf].
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<div style="clear:both"></div>
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===Native T4 RNase H in the absence of divalent metal ions===
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==See Also==
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*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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3H8J is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H8J OCA].
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[[Category: Escherichia virus T4]]
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[[Category: Enterobacteria phage t4]]
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[[Category: Large Structures]]
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[[Category: Ribonuclease H]]
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[[Category: Mueser TC]]
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[[Category: Mueser, T C.]]
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[[Category: Tomanicek SJ]]
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[[Category: Tomanicek, S J.]]
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[[Category: 5'-3' exonuclease]]
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[[Category: Bpt4 rnase h]]
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[[Category: Endonuclease]]
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[[Category: Hydrolase]]
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[[Category: Nuclease]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:14:25 2010''
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Current revision

Native T4 RNase H in the absence of divalent metal ions

PDB ID 3h8j

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