This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hko

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:23, 6 September 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3hko.png|left|200px]]
 
-
<!--
+
==Crystal structure of a cdpk kinase domain from cryptosporidium Parvum, cgd7_40==
-
The line below this paragraph, containing "STRUCTURE_3hko", creates the "Structure Box" on the page.
+
<StructureSection load='3hko' size='340' side='right'caption='[[3hko]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hko]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HKO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HKO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3hko| PDB=3hko | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hko FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hko OCA], [https://pdbe.org/3hko PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hko RCSB], [https://www.ebi.ac.uk/pdbsum/3hko PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hko ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5CZ29_CRYPI Q5CZ29_CRYPI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hk/3hko_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hko ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of a cdpk kinase domain from cryptosporidium Parvum, cgd7_40===
+
==See Also==
-
 
+
*[[Calcium-dependent protein kinase|Calcium-dependent protein kinase]]
-
 
+
*[[Calcium/calmodulin dependent protein kinase 3D structures|Calcium/calmodulin dependent protein kinase 3D structures]]
-
==About this Structure==
+
__TOC__
-
3HKO is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Cryptosporidium_parvum_iowa_ii Cryptosporidium parvum iowa ii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HKO OCA].
+
</StructureSection>
-
[[Category: Cryptosporidium parvum iowa ii]]
+
[[Category: Cryptosporidium parvum Iowa II]]
-
[[Category: Amani, M.]]
+
[[Category: Large Structures]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Amani M]]
-
[[Category: Artz, J D.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Botchkarev, A.]]
+
[[Category: Artz JD]]
-
[[Category: Bountra, C.]]
+
[[Category: Botchkarev A]]
-
[[Category: Cossar, D.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A M.]]
+
[[Category: Cossar D]]
-
[[Category: Hui, R.]]
+
[[Category: Edwards AM]]
-
[[Category: Hutchinson, A.]]
+
[[Category: Hui R]]
-
[[Category: Kozieradzki, I.]]
+
[[Category: Hutchinson A]]
-
[[Category: MacKenzie, F.]]
+
[[Category: Kozieradzki I]]
-
[[Category: Vedadi, M.]]
+
[[Category: MacKenzie F]]
-
[[Category: Wasney, G.]]
+
[[Category: Vedadi M]]
-
[[Category: Weigelt, J.]]
+
[[Category: Wasney G]]
-
[[Category: Wernimont, A K.]]
+
[[Category: Weigelt J]]
-
[[Category: Atp-binding]]
+
[[Category: Wernimont AK]]
-
[[Category: Calcium]]
+
-
[[Category: Cdpk]]
+
-
[[Category: Cryptosporidium parvum]]
+
-
[[Category: Kinase]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Protist parasite]]
+
-
[[Category: Serine/threonine-protein kinase]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Transferase]]
+
-
[[Category: Zinc finger]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat Jul 4 18:02:50 2009''
+

Current revision

Crystal structure of a cdpk kinase domain from cryptosporidium Parvum, cgd7_40

PDB ID 3hko

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3hko"
Personal tools