3i1e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:36, 6 September 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3i1e.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the PDZ domain of the SdrC-like Protein (Lin2157) from Listeria innocua, Northeast Structural Genomics Consortium Target LkR136C==
-
The line below this paragraph, containing "STRUCTURE_3i1e", creates the "Structure Box" on the page.
+
<StructureSection load='3i1e' size='340' side='right'caption='[[3i1e]], [[Resolution|resolution]] 2.91&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3i1e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I1E FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.91&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i1e OCA], [https://pdbe.org/3i1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i1e RCSB], [https://www.ebi.ac.uk/pdbsum/3i1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i1e ProSAT], [https://www.topsan.org/Proteins/NESGC/3i1e TOPSAN]</span></td></tr>
-
{{STRUCTURE_3i1e| PDB=3i1e | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of the PDZ domain of the SdrC-like Protein (Lin2157) from Listeria innocua, Northeast Structural Genomics Consortium Target LkR136C===
+
[https://www.uniprot.org/uniprot/Q929W6_LISIN Q929W6_LISIN]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3I1E is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I1E OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i1/3i1e_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i1e ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Listeria innocua]]
[[Category: Listeria innocua]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Ciccosanti,C.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Everett, J K.]]
+
[[Category: Everett JK]]
-
[[Category: Foote,E L.]]
+
[[Category: Foote EL]]
-
[[Category: Forouhar,F.]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt,J F.]]
+
[[Category: Hunt JF]]
-
[[Category: Lee,D.]]
+
[[Category: Lee D]]
-
[[Category: Lew, S.]]
+
[[Category: Lew S]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Nair R]]
-
[[Category: Nair, R.]]
+
[[Category: Rost B]]
-
[[Category: Rost, B.]]
+
[[Category: Sahdev S]]
-
[[Category: Sahdev,S.]]
+
[[Category: Seetharaman J]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Tong L]]
-
[[Category: Tong,L.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao,R.]]
+
-
[[Category: Alpha-beta protein.]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 15 13:54:50 2009''
+

Current revision

Crystal Structure of the PDZ domain of the SdrC-like Protein (Lin2157) from Listeria innocua, Northeast Structural Genomics Consortium Target LkR136C

PDB ID 3i1e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools