This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3iue

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 6 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of pantothenate synthetase in complex with 2-(5-methoxy-2-(5-Methylpyridin-2-ylsulfonylcarbamoyl)-1H-indol-1-yl) acetic acid==
==Crystal structure of pantothenate synthetase in complex with 2-(5-methoxy-2-(5-Methylpyridin-2-ylsulfonylcarbamoyl)-1H-indol-1-yl) acetic acid==
-
<StructureSection load='3iue' size='340' side='right' caption='[[3iue]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
+
<StructureSection load='3iue' size='340' side='right'caption='[[3iue]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3iue]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IUE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IUE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3iue]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IUE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=FG3:(5-METHOXY-2-{[(5-METHYLPYRIDIN-2-YL)SULFONYL]CARBAMOYL}-1H-INDOL-1-YL)ACETIC+ACID'>FG3</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.73&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ivg|3ivg]], [[3ivc|3ivc]], [[3iub|3iub]], [[3ivx|3ivx]], [[3img|3img]], [[3imc|3imc]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=FG3:(5-METHOXY-2-{[(5-METHYLPYRIDIN-2-YL)SULFONYL]CARBAMOYL}-1H-INDOL-1-YL)ACETIC+ACID'>FG3</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MT3707, MTCY07H7B.20, panC, Rv3602c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iue OCA], [https://pdbe.org/3iue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iue RCSB], [https://www.ebi.ac.uk/pdbsum/3iue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iue ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantoate--beta-alanine_ligase Pantoate--beta-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.1 6.3.2.1] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iue OCA], [http://pdbe.org/3iue PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iue RCSB], [http://www.ebi.ac.uk/pdbsum/3iue PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iue ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PANC_MYCTU PANC_MYCTU]] Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.<ref>PMID:11669627</ref>
+
[https://www.uniprot.org/uniprot/PANC_MYCTU PANC_MYCTU] Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.<ref>PMID:11669627</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 29: Line 27:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pantoate--beta-alanine ligase]]
+
[[Category: Large Structures]]
-
[[Category: Abell, C]]
+
-
[[Category: Blundell, T L]]
+
-
[[Category: Ciulli, A]]
+
-
[[Category: Hung, A W]]
+
-
[[Category: Silvestre, H L]]
+
-
[[Category: Wen, S]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Fragment-based lead discovery]]
+
-
[[Category: Ligase]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Metal-binding]]
+
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Nucleotide-binding]]
+
[[Category: Abell C]]
-
[[Category: Pantothenate biosynthesis]]
+
[[Category: Blundell TL]]
-
[[Category: Pantothenate synthetase]]
+
[[Category: Ciulli A]]
 +
[[Category: Hung AW]]
 +
[[Category: Silvestre HL]]
 +
[[Category: Wen S]]

Current revision

Crystal structure of pantothenate synthetase in complex with 2-(5-methoxy-2-(5-Methylpyridin-2-ylsulfonylcarbamoyl)-1H-indol-1-yl) acetic acid

PDB ID 3iue

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools