3jyq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:06, 6 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Quinate dehydrogenase from Corynebacterium glutamicum in complex with shikimate and NADH==
==Quinate dehydrogenase from Corynebacterium glutamicum in complex with shikimate and NADH==
-
<StructureSection load='3jyq' size='340' side='right' caption='[[3jyq]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
+
<StructureSection load='3jyq' size='340' side='right'caption='[[3jyq]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3jyq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum_atcc_13032 Corynebacterium glutamicum atcc 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JYQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3jyq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JYQ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SKM:(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC+ACID'>SKM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.16&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2nlo|2nlo]], [[3jyo|3jyo]], [[3jyp|3jyp]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SKM:(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC+ACID'>SKM</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aroE, cg0504, Cgl0424 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=196627 Corynebacterium glutamicum ATCC 13032])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jyq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jyq OCA], [https://pdbe.org/3jyq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jyq RCSB], [https://www.ebi.ac.uk/pdbsum/3jyq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jyq ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jyq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jyq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jyq RCSB], [http://www.ebi.ac.uk/pdbsum/3jyq PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROE_CORGL AROE_CORGL] Catalyzes the NAD(+)-dependent oxidation of both quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate, respectively. Seems to play a key role in the quinate degradation pathway.<ref>PMID:18566515</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3jyq" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Shikimate dehydrogenase|Shikimate dehydrogenase]]
+
*[[Shikimate dehydrogenase 3D structures|Shikimate dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Corynebacterium glutamicum atcc 13032]]
+
[[Category: Corynebacterium glutamicum ATCC 13032]]
-
[[Category: Hoeppner, A]]
+
[[Category: Large Structures]]
-
[[Category: Niefind, K]]
+
[[Category: Hoeppner A]]
-
[[Category: Schomburg, D]]
+
[[Category: Niefind K]]
-
[[Category: Amino-acid biosynthesis]]
+
[[Category: Schomburg D]]
-
[[Category: Aromatic amino acid biosynthesis]]
+
-
[[Category: Nad]]
+
-
[[Category: Nadh]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Quinate dehyrogenase]]
+
-
[[Category: Shikimate]]
+
-
[[Category: Ternary complex]]
+

Current revision

Quinate dehydrogenase from Corynebacterium glutamicum in complex with shikimate and NADH

PDB ID 3jyq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools