This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k87

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:11, 6 September 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD complex==
==Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD complex==
-
<StructureSection load='3k87' size='340' side='right' caption='[[3k87]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='3k87' size='340' side='right'caption='[[3k87]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3k87]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"pseudomonas_cepacia"_burkholder_1950 "pseudomonas cepacia" burkholder 1950]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K87 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K87 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3k87]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_cepacia Burkholderia cepacia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K87 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K87 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3k86|3k86]], [[3k88|3k88]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tftC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292 "Pseudomonas cepacia" Burkholder 1950])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k87 OCA], [https://pdbe.org/3k87 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k87 RCSB], [https://www.ebi.ac.uk/pdbsum/3k87 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k87 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k87 OCA], [http://pdbe.org/3k87 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k87 RCSB], [http://www.ebi.ac.uk/pdbsum/3k87 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k87 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TFTC_BURCE TFTC_BURCE]] Reductase component of a two-component system that degrades 2,4,5-trichlorophenol. TftC provides the FADH(2) required by TftD. TftD oxidizes 2,4,5-trichlorophenol (2,4,5-TCP) to 2,5-dichloro-p-benzoquinone, which is chemically reduced to 2,5-dichloro-p-hydroquinone (2,5-DiCHQ). Then, TftD oxidizes the latter to 5-chloro-2-hydroxy-p-benzoquinone.<ref>PMID:12700257</ref> <ref>PMID:19915006</ref>
+
[https://www.uniprot.org/uniprot/TFTC_BURCE TFTC_BURCE] Reductase component of a two-component system that degrades 2,4,5-trichlorophenol. TftC provides the FADH(2) required by TftD. TftD oxidizes 2,4,5-trichlorophenol (2,4,5-TCP) to 2,5-dichloro-p-benzoquinone, which is chemically reduced to 2,5-dichloro-p-hydroquinone (2,5-DiCHQ). Then, TftD oxidizes the latter to 5-chloro-2-hydroxy-p-benzoquinone.<ref>PMID:12700257</ref> <ref>PMID:19915006</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 31:
==See Also==
==See Also==
-
*[[Monooxygenase|Monooxygenase]]
+
*[[Monooxygenase 3D structures|Monooxygenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pseudomonas cepacia burkholder 1950]]
+
[[Category: Burkholderia cepacia]]
-
[[Category: Kang, C H]]
+
[[Category: Large Structures]]
-
[[Category: Webb, B N]]
+
[[Category: Kang CH]]
-
[[Category: Monooxygenase]]
+
[[Category: Webb BN]]
-
[[Category: Nadh:fad oxidoreductase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD complex

PDB ID 3k87

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3k87"
Personal tools