This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k9h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3k9h" [edit=sysop:move=sysop])
Current revision (08:12, 6 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3k9h| PDB=3k9h | SCENE= }}
 
-
===Crystal structure of a plasmid partition protein from borrelia burgdorferi at 2.25A resolution===
 
-
==About this Structure==
+
==Crystal structure of a plasmid partition protein from borrelia burgdorferi at 2.25A resolution==
-
[[3k9h]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Borrelia_burgdorferi Borrelia burgdorferi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K9H OCA].
+
<StructureSection load='3k9h' size='340' side='right'caption='[[3k9h]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
[[Category: Borrelia burgdorferi]]
+
== Structural highlights ==
-
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+
<table><tr><td colspan='2'>[[3k9h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Borreliella_burgdorferi_B31 Borreliella burgdorferi B31]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K9H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K9H FirstGlance]. <br>
-
[[Category: Biosynthetic protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
[[Category: Borellia burgdorferi]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Decode biostructure]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k9h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k9h OCA], [https://pdbe.org/3k9h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k9h RCSB], [https://www.ebi.ac.uk/pdbsum/3k9h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k9h ProSAT]</span></td></tr>
-
[[Category: Niaid]]
+
</table>
-
[[Category: Nih]]
+
== Function ==
-
[[Category: Plasmid partition protein]]
+
[https://www.uniprot.org/uniprot/O68233_BORBG O68233_BORBG]
-
[[Category: Sbri]]
+
== Evolutionary Conservation ==
-
[[Category: Seattle structural genomics center for infectious disease]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ssgcid]]
+
Check<jmol>
-
[[Category: Structural genomic]]
+
<jmolCheckbox>
-
[[Category: Uw]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k9/3k9h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k9h ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Borreliella burgdorferi B31]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of a plasmid partition protein from borrelia burgdorferi at 2.25A resolution

PDB ID 3k9h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools