This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3km1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:18, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3km1' size='340' side='right'caption='[[3km1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3km1' size='340' side='right'caption='[[3km1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3km1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lycopersicon_esculentum Lycopersicon esculentum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KM1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3km1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KM1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3hog|3hog]], [[3km2|3km2]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SODCP.2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3km1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3km1 OCA], [https://pdbe.org/3km1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3km1 RCSB], [https://www.ebi.ac.uk/pdbsum/3km1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3km1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3km1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3km1 OCA], [https://pdbe.org/3km1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3km1 RCSB], [https://www.ebi.ac.uk/pdbsum/3km1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3km1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/SODCP_SOLLC SODCP_SOLLC]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
+
[https://www.uniprot.org/uniprot/SODCP_SOLLC SODCP_SOLLC] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
==See Also==
==See Also==
Line 18: Line 16:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lycopersicon esculentum]]
+
[[Category: Solanum lycopersicum]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Galaleldeen A]]
-
[[Category: Galaleldeen, A]]
+
[[Category: Hart PJ]]
-
[[Category: Hart, P J]]
+
[[Category: Taylor AB]]
-
[[Category: Taylor, A B]]
+
[[Category: Thomas ST]]
-
[[Category: Thomas, S T]]
+
-
[[Category: Antioxidant]]
+
-
[[Category: Chloroplast]]
+
-
[[Category: Disulfide bond]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Tomato cu]]
+
-
[[Category: Transit peptide]]
+
-
[[Category: Zn superoxide dismutase]]
+

Current revision

ZINC-Reconstituted TOMATO CHLOROPLAST SUPEROXIDE DISMUTASE

PDB ID 3km1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools