This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kyr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3kyr" [edit=sysop:move=sysop])
Current revision (08:26, 6 September 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3kyr.jpg|left|200px]]
 
-
<!--
+
==Bace-1 in complex with a norstatine type inhibitor==
-
The line below this paragraph, containing "STRUCTURE_3kyr", creates the "Structure Box" on the page.
+
<StructureSection load='3kyr' size='340' side='right'caption='[[3kyr]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3kyr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KYR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KYR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=038:3-[[(2S)-2-[[[(2S)-2-[[(2S)-2-[[(2S)-2-azanyl-3-(1H-1,2,3,4-tetrazol-5-ylcarbonylamino)propanoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-pentanoyl]amino]methyl]-2-hydroxy-4-phenyl-butanoyl]amino]benzoic+acid'>038</scene></td></tr>
-
{{STRUCTURE_3kyr| PDB=3kyr | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kyr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kyr OCA], [https://pdbe.org/3kyr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kyr RCSB], [https://www.ebi.ac.uk/pdbsum/3kyr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kyr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BACE1_HUMAN BACE1_HUMAN] Responsible for the proteolytic processing of the amyloid precursor protein (APP). Cleaves at the N-terminus of the A-beta peptide sequence, between residues 671 and 672 of APP, leads to the generation and extracellular release of beta-cleaved soluble APP, and a corresponding cell-associated C-terminal fragment which is later released by gamma-secretase.<ref>PMID:10677483</ref> <ref>PMID:20354142</ref>
-
===Bace-1 in complex with a norstatine type inhibitor===
+
==See Also==
-
 
+
*[[Beta secretase 3D structures|Beta secretase 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[3kyr]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KYR OCA].
+
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Memapsin 2]]
+
[[Category: Large Structures]]
-
[[Category: Borkakoti, N.]]
+
[[Category: Borkakoti N]]
-
[[Category: Derbyshire, D.]]
+
[[Category: Derbyshire D]]
-
[[Category: Lindberg, J D.]]
+
[[Category: Lindberg JD]]
-
[[Category: Nystrom, S.]]
+
[[Category: Nystrom S]]
-
[[Category: Aspartyl protease]]
+
-
[[Category: Bace]]
+
-
[[Category: Beta-secretase]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Memapsin-2]]
+
-
[[Category: Norstatine]]
+

Current revision

Bace-1 in complex with a norstatine type inhibitor

PDB ID 3kyr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools