This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lai

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:33, 6 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structural insights into the molecular mechanism of H-NOX activation==
==Structural insights into the molecular mechanism of H-NOX activation==
-
<StructureSection load='3lai' size='340' side='right' caption='[[3lai]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
+
<StructureSection load='3lai' size='340' side='right'caption='[[3lai]], [[Resolution|resolution]] 2.14&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3lai]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/As_1.2430 As 1.2430]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LAI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3lai]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LAI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.144&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1u55|1u55]], [[1u56|1u56]], [[1u4h|1u4h]], [[3eee|3eee]], [[3iqb|3iqb]], [[3lah|3lah]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tar4, TTE0680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119072 AS 1.2430])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lai OCA], [https://pdbe.org/3lai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lai RCSB], [https://www.ebi.ac.uk/pdbsum/3lai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lai ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lai OCA], [http://pdbe.org/3lai PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lai RCSB], [http://www.ebi.ac.uk/pdbsum/3lai PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lai ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8RBX6_CALS4 Q8RBX6_CALS4]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 31:
==See Also==
==See Also==
-
*[[Chemotaxis protein|Chemotaxis protein]]
+
*[[Chemotaxis protein 3D structures|Chemotaxis protein 3D structures]]
*[[Methyl-accepting chemotaxis protein|Methyl-accepting chemotaxis protein]]
*[[Methyl-accepting chemotaxis protein|Methyl-accepting chemotaxis protein]]
== References ==
== References ==
Line 36: Line 37:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: As 1 2430]]
+
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
-
[[Category: Jr, C Olea]]
+
[[Category: Large Structures]]
-
[[Category: Jr, M A.Herzik]]
+
[[Category: Herzik Jr MA]]
-
[[Category: Kuriyan, J]]
+
[[Category: Kuriyan J]]
-
[[Category: Marletta, M A]]
+
[[Category: Marletta MA]]
-
[[Category: Signaling protein]]
+
[[Category: Olea Jr C]]

Current revision

Structural insights into the molecular mechanism of H-NOX activation

PDB ID 3lai

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools