3n0i

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[[Image:3n0i.png|left|200px]]
 
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==Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide==
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The line below this paragraph, containing "STRUCTURE_3n0i", creates the "Structure Box" on the page.
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<StructureSection load='3n0i' size='340' side='right'caption='[[3n0i]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3n0i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_adenovirus_D37 Human adenovirus D37]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N0I FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_3n0i| PDB=3n0i | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n0i OCA], [https://pdbe.org/3n0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n0i RCSB], [https://www.ebi.ac.uk/pdbsum/3n0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n0i ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q64823_9ADEN Q64823_9ADEN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Adenovirus type 37 (Ad37) is a leading cause of epidemic keratoconjunctivitis (EKC), a severe and highly contagious ocular disease. Whereas most other adenoviruses infect cells by engaging CD46 or the coxsackie and adenovirus receptor (CAR), Ad37 binds previously unknown sialic acid-containing cell surface molecules. By glycan array screening, we show here that the receptor-recognizing knob domain of the Ad37 fiber protein specifically binds a branched hexasaccharide that is present in the GD1a ganglioside and that features two terminal sialic acids. Soluble GD1a glycan and GD1a-binding antibodies efficiently prevented Ad37 virions from binding and infecting corneal cells. Unexpectedly, the receptor is constituted by one or more glycoproteins containing the GD1a glycan motif rather than the ganglioside itself, as shown by binding, infection and flow cytometry experiments. Molecular modeling, nuclear magnetic resonance and X-ray crystallography reveal that the two terminal sialic acids dock into two of three previously established sialic acid-binding sites in the trimeric Ad37 knob. Surface plasmon resonance analysis shows that the knob-GD1a glycan interaction has high affinity. Our findings therefore form a basis for the design and development of sialic acid-containing antiviral drugs for topical treatment of EKC.
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===Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide===
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The GD1a glycan is a cellular receptor for adenoviruses causing epidemic keratoconjunctivitis.,Nilsson EC, Storm RJ, Bauer J, Johansson SM, Lookene A, Angstrom J, Hedenstrom M, Eriksson TL, Frangsmyr L, Rinaldi S, Willison HJ, Domellof FP, Stehle T, Arnberg N Nat Med. 2010 Dec 12. PMID:21151139<ref>PMID:21151139</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3n0i" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 21151139 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21151139}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Human adenovirus D37]]
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[[3n0i]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_adenovirus_37 Human adenovirus 37]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N0I OCA].
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[[Category: Large Structures]]
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[[Category: Angstroem J]]
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==Reference==
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[[Category: Arnberg N]]
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<ref group="xtra">PMID:21151139</ref><references group="xtra"/>
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[[Category: Bauer J]]
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[[Category: Human adenovirus 37]]
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[[Category: Domelloef FP]]
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[[Category: Angstroem, J.]]
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[[Category: Fraengsmyr L]]
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[[Category: Arnberg, N.]]
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[[Category: Hedenstroem M]]
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[[Category: Bauer, J.]]
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[[Category: Johansson SMC]]
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[[Category: Domelloef, F P.]]
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[[Category: Lookene A]]
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[[Category: Fraengsmyr, L.]]
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[[Category: Nilsson EC]]
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[[Category: Hedenstroem, M.]]
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[[Category: Rinaldi S]]
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[[Category: Johansson, S M.C.]]
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[[Category: Stehle T]]
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[[Category: Lookene, A.]]
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[[Category: Storm RJ]]
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[[Category: Nilsson, E C.]]
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[[Category: Willison H]]
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[[Category: Rinaldi, S.]]
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[[Category: Stehle, T.]]
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[[Category: Storm, R J.]]
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[[Category: Willison, H.]]
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Current revision

Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide

PDB ID 3n0i

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