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3n75

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==X-ray Crystal Structure of the Escherichia coli Inducible Lysine Decarboxylase LdcI==
==X-ray Crystal Structure of the Escherichia coli Inducible Lysine Decarboxylase LdcI==
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<StructureSection load='3n75' size='340' side='right' caption='[[3n75]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='3n75' size='340' side='right'caption='[[3n75]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3n75]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N75 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3N75 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3n75]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N75 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N75 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=G4P:GUANOSINE-5,3-TETRAPHOSPHATE'>G4P</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G4P:GUANOSINE-5,3-TETRAPHOSPHATE'>G4P</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b4131, cadA, JW4092, ldcI, LdcI/CadA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n75 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n75 OCA], [https://pdbe.org/3n75 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n75 RCSB], [https://www.ebi.ac.uk/pdbsum/3n75 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n75 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine_decarboxylase Lysine decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.18 4.1.1.18] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3n75 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n75 OCA], [http://pdbe.org/3n75 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3n75 RCSB], [http://www.ebi.ac.uk/pdbsum/3n75 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3n75 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/LDCI_ECOLI LDCI_ECOLI]] Plays a role in pH homeostasis by consuming protons and neutralizing the acidic by-products of carbohydrate fermentation.
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[https://www.uniprot.org/uniprot/LDCI_ECOLI LDCI_ECOLI] Plays a role in pH homeostasis by consuming protons and neutralizing the acidic by-products of carbohydrate fermentation.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecoli]]
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[[Category: Escherichia coli K-12]]
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[[Category: Lysine decarboxylase]]
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[[Category: Large Structures]]
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[[Category: Alexopoulos, E]]
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[[Category: Alexopoulos E]]
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[[Category: Houry, W A]]
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[[Category: Houry WA]]
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[[Category: Kanjee, U]]
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[[Category: Kanjee U]]
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[[Category: Pai, E F]]
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[[Category: Pai EF]]
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[[Category: Acid stress response]]
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[[Category: Lyase]]
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[[Category: Pyridoxal-5'-phosphate dependent decarboxylase]]
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[[Category: Stringent response]]
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Current revision

X-ray Crystal Structure of the Escherichia coli Inducible Lysine Decarboxylase LdcI

PDB ID 3n75

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