This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3nz2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:24, 6 September 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3nz2.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of Hexapeptide-Repeat containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A from Vibrio cholerae O1 biovar eltor==
-
The line below this paragraph, containing "STRUCTURE_3nz2", creates the "Structure Box" on the page.
+
<StructureSection load='3nz2' size='340' side='right'caption='[[3nz2]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3nz2]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NZ2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BU1:1,4-BUTANEDIOL'>BU1</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3nz2| PDB=3nz2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nz2 OCA], [https://pdbe.org/3nz2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nz2 RCSB], [https://www.ebi.ac.uk/pdbsum/3nz2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nz2 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Hexapeptide-Repeat containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A from Vibrio cholerae O1 biovar eltor===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9KLB0_VIBCH Q9KLB0_VIBCH]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3NZ2 is a 12 chains structure with sequences from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor Vibrio cholerae o1 biovar el tor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NZ2 OCA].
+
Check<jmol>
-
[[Category: Vibrio cholerae o1 biovar el tor]]
+
<jmolCheckbox>
-
[[Category: Anderson, W F.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nz/3nz2_consurf.spt"</scriptWhenChecked>
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Hasseman, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: Kim, Y.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nz2 ConSurf].
-
[[Category: Maltseva, N.]]
+
<div style="clear:both"></div>
-
[[Category: Beta-helix]]
+
__TOC__
-
[[Category: Center for structural genomics of infectious disease]]
+
</StructureSection>
-
[[Category: Csgid]]
+
[[Category: Large Structures]]
-
[[Category: Methyltransferase]]
+
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
-
[[Category: Structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Transferase]]
+
[[Category: Hasseman J]]
-
 
+
[[Category: Joachimiak A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 4 09:14:19 2010''
+
[[Category: Kim Y]]
 +
[[Category: Maltseva N]]

Current revision

Crystal Structure of Hexapeptide-Repeat containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A from Vibrio cholerae O1 biovar eltor

PDB ID 3nz2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools