This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3oj1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:40, 6 September 2023) (edit) (undo)
 
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3oj1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJ1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3oj1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJ1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.52&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qfk|2qfk]], [[2qfn|2qfn]], [[3dr9|3dr9]], [[3ixf|3ixf]], [[3kuo|3kuo]], [[3ok5|3ok5]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhpA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=129555 Amphitrite ornata])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj1 OCA], [https://pdbe.org/3oj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oj1 RCSB], [https://www.ebi.ac.uk/pdbsum/3oj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj1 OCA], [https://pdbe.org/3oj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oj1 RCSB], [https://www.ebi.ac.uk/pdbsum/3oj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj1 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9NAV8_9ANNE Q9NAV8_9ANNE]
==See Also==
==See Also==
Line 16: Line 17:
[[Category: Amphitrite ornata]]
[[Category: Amphitrite ornata]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Franzen, S]]
+
[[Category: De Serrano VS]]
-
[[Category: Serrano, V S.De]]
+
[[Category: Franzen S]]
-
[[Category: Zhao, J]]
+
[[Category: Zhao J]]
-
[[Category: Dehalopeoxidase]]
+
-
[[Category: Globin]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peoxidase]]
+

Current revision

Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata

PDB ID 3oj1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools