This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pvn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:01, 6 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Triclinic form of Human C-Reactive Protein in complex with Zinc==
==Triclinic form of Human C-Reactive Protein in complex with Zinc==
-
<StructureSection load='3pvn' size='340' side='right' caption='[[3pvn]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
+
<StructureSection load='3pvn' size='340' side='right'caption='[[3pvn]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3pvn]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PVN FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3pvn]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PVN FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1lj7|1lj7]], [[3pvo|3pvo]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CRP, PTX1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pvn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pvn OCA], [https://pdbe.org/3pvn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pvn RCSB], [https://www.ebi.ac.uk/pdbsum/3pvn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pvn ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pvn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pvn OCA], [http://pdbe.org/3pvn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3pvn RCSB], [http://www.ebi.ac.uk/pdbsum/3pvn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3pvn ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CRP_HUMAN CRP_HUMAN]] Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells.
+
[https://www.uniprot.org/uniprot/CRP_HUMAN CRP_HUMAN] Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 3pvn" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3pvn" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[C-reactive protein|C-reactive protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Bigouagou, U Mavoungou]]
+
[[Category: Large Structures]]
-
[[Category: Delneste, Y]]
+
[[Category: Delneste Y]]
-
[[Category: Gouet, P]]
+
[[Category: Gouet P]]
-
[[Category: Guillon, C]]
+
[[Category: Guillon C]]
-
[[Category: Jeannin, P]]
+
[[Category: Jeannin P]]
-
[[Category: Immune system]]
+
[[Category: Mavoungou Bigouagou U]]
-
[[Category: Pentraxin family]]
+

Current revision

Triclinic form of Human C-Reactive Protein in complex with Zinc

PDB ID 3pvn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools