8h2i

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'''Unreleased structure'''
 
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The entry 8h2i is ON HOLD until Paper Publication
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==Near-atomic structure of five-fold averaged PBCV-1 capsid==
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<StructureSection load='8h2i' size='340' side='right'caption='[[8h2i]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8h2i]] is a 106 chain structure with sequence from [https://en.wikipedia.org/wiki/Paramecium_bursaria_Chlorella_virus_1 Paramecium bursaria Chlorella virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H2I FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h2i OCA], [https://pdbe.org/8h2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h2i RCSB], [https://www.ebi.ac.uk/pdbsum/8h2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h2i ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MCP_PBCV1 MCP_PBCV1]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Giant viruses are a large group of viruses that infect many eukaryotes. Although components that do not obey the overall icosahedral symmetry of their capsids have been observed and found to play critical roles in the viral life cycles, identities and high-resolution structures of these components remain unknown. Here, by determining a near-atomic-resolution, five-fold averaged structure of Paramecium bursaria chlorella virus 1, we unexpectedly found the viral capsid possesses up to five major capsid protein variants and a penton protein variant. These variants create varied capsid microenvironments for the associations of fibers, a vesicle, and previously unresolved minor capsid proteins. Our structure reveals the identities and atomic models of the capsid components that do not obey the overall icosahedral symmetry and leads to a model for how these components are assembled and initiate capsid assembly, and this model might be applicable to many other giant viruses.
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Authors:
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Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.,Shao Q, Agarkova IV, Noel EA, Dunigan DD, Liu Y, Wang A, Guo M, Xie L, Zhao X, Rossmann MG, Van Etten JL, Klose T, Fang Q Nat Commun. 2022 Oct 29;13(1):6476. doi: 10.1038/s41467-022-34218-4. PMID:36309542<ref>PMID:36309542</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 8h2i" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Paramecium bursaria Chlorella virus 1]]
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[[Category: Agarkova IV]]
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[[Category: Dunigan DD]]
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[[Category: Fang Q]]
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[[Category: Guo M]]
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[[Category: Klose T]]
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[[Category: Liu Y]]
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[[Category: Noel EA]]
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[[Category: Rossmann MG]]
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[[Category: Shao Q]]
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[[Category: Van Etten JL]]
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[[Category: Wang A]]
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[[Category: Xie L]]
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[[Category: Zhao X]]

Current revision

Near-atomic structure of five-fold averaged PBCV-1 capsid

PDB ID 8h2i

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