This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5j8w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:54, 6 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==One minute iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A==
==One minute iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A==
-
<StructureSection load='5j8w' size='340' side='right' caption='[[5j8w]], [[Resolution|resolution]] 1.11&Aring;' scene=''>
+
<StructureSection load='5j8w' size='340' side='right'caption='[[5j8w]], [[Resolution|resolution]] 1.11&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5j8w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/American_bullfrog American bullfrog]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J8W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J8W FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5j8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lithobates_catesbeianus Lithobates catesbeianus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J8W FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.11&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5j8s|5j8s]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferroxidase Ferroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.16.3.1 1.16.3.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j8w OCA], [https://pdbe.org/5j8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j8w RCSB], [https://www.ebi.ac.uk/pdbsum/5j8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j8w ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j8w OCA], [http://pdbe.org/5j8w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j8w RCSB], [http://www.ebi.ac.uk/pdbsum/5j8w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j8w ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FRI2_LITCT FRI2_LITCT]] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
+
[https://www.uniprot.org/uniprot/FRI2_LITCT FRI2_LITCT] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5j8w" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5j8w" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ferritin 3D structures|Ferritin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: American bullfrog]]
+
[[Category: Large Structures]]
-
[[Category: Ferroxidase]]
+
[[Category: Lithobates catesbeianus]]
-
[[Category: Bernacchioni, C]]
+
[[Category: Bernacchioni C]]
-
[[Category: Mangani, S]]
+
[[Category: Di Pisa F]]
-
[[Category: Pisa, F Di]]
+
[[Category: Mangani S]]
-
[[Category: Pozzi, C]]
+
[[Category: Pozzi C]]
-
[[Category: Turano, P]]
+
[[Category: Turano P]]
-
[[Category: Ferritin variant]]
+
-
[[Category: Ferroxidase activity]]
+
-
[[Category: H' type]]
+
-
[[Category: Iron]]
+
-
[[Category: M type]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Oxidoreductase activity]]
+
-
[[Category: Rana catesbeiana]]
+

Current revision

One minute iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A

PDB ID 5j8w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5j8w"
Personal tools