This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1o25

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:51, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1o25' size='340' side='right'caption='[[1o25]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='1o25' size='340' side='right'caption='[[1o25]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1o25]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O25 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1O25 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1o25]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O25 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UMP:2-DEOXYURIDINE+5-MONOPHOSPHATE'>UMP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1o24|1o24]], [[1o26|1o26]], [[1o27|1o27]], [[1o28|1o28]], [[1o29|1o29]], [[1o2a|1o2a]], [[1o2b|1o2b]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UMP:2-DEOXYURIDINE+5-MONOPHOSPHATE'>UMP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM0449 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o25 OCA], [https://pdbe.org/1o25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o25 RCSB], [https://www.ebi.ac.uk/pdbsum/1o25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o25 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1o25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o25 OCA], [http://pdbe.org/1o25 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1o25 RCSB], [http://www.ebi.ac.uk/pdbsum/1o25 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1o25 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/THYX_THEMA THYX_THEMA]] Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate.
+
[https://www.uniprot.org/uniprot/THYX_THEMA THYX_THEMA] Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43589]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Agarwalla, S]]
+
[[Category: Thermotoga maritima]]
-
[[Category: Canaves, J M]]
+
[[Category: Agarwalla S]]
-
[[Category: Deacon, A M]]
+
[[Category: Canaves JM]]
-
[[Category: Structural genomic]]
+
[[Category: Deacon AM]]
-
[[Category: Kuhn, P]]
+
[[Category: Kuhn P]]
-
[[Category: Lesley, S A]]
+
[[Category: Lesley SA]]
-
[[Category: Mathews, I I]]
+
[[Category: Mathews II]]
-
[[Category: McMullan, D]]
+
[[Category: McMullan D]]
-
[[Category: Jcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Thymidylate synthase complementing protein]]
+
-
[[Category: Tm0449]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with dUMP at 2.4 A resolution

PDB ID 1o25

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1o25"
Personal tools