This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4hjf
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++== | ==EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++== | ||
| - | <StructureSection load='4hjf' size='340' side='right' caption='[[4hjf]], [[Resolution|resolution]] 1.75Å' scene=''> | + | <StructureSection load='4hjf' size='340' side='right'caption='[[4hjf]], [[Resolution|resolution]] 1.75Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4hjf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4hjf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_vibrioides_CB15 Caulobacter vibrioides CB15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HJF FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R, | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hjf OCA], [https://pdbe.org/4hjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hjf RCSB], [https://www.ebi.ac.uk/pdbsum/4hjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hjf ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9A310_CAUVC Q9A310_CAUVC] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Caulobacter vibrioides CB15]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Anderson WF]] |
| - | [[Category: | + | [[Category: Filippova EV]] |
| - | [[Category: | + | [[Category: Joachimiak A]] |
| - | [[Category: | + | [[Category: Kiryukhina O]] |
| - | [[Category: Massa | + | [[Category: Massa C]] |
| - | [[Category: Minasov | + | [[Category: Minasov G]] |
| - | [[Category: Schirmer | + | [[Category: Schirmer T]] |
| - | [[Category: Shuvalova | + | [[Category: Shuvalova L]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++
| |||||||||||
