This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4i1v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:13, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP==
==Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP==
-
<StructureSection load='4i1v' size='340' side='right' caption='[[4i1v]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='4i1v' size='340' side='right'caption='[[4i1v]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4i1v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burvg Burvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I1V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4I1V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4i1v]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_vietnamiensis_G4 Burkholderia vietnamiensis G4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I1V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4I1V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4i1u|4i1u]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bcep1808_0550, coaE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269482 BURVG])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4i1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i1v OCA], [https://pdbe.org/4i1v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4i1v RCSB], [https://www.ebi.ac.uk/pdbsum/4i1v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4i1v ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dephospho-CoA_kinase Dephospho-CoA kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.24 2.7.1.24] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4i1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i1v OCA], [http://pdbe.org/4i1v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4i1v RCSB], [http://www.ebi.ac.uk/pdbsum/4i1v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4i1v ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/A4JBA9_BURVG A4JBA9_BURVG]] Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.[HAMAP-Rule:MF_00376]
+
[https://www.uniprot.org/uniprot/A4JBA9_BURVG A4JBA9_BURVG] Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.[HAMAP-Rule:MF_00376]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Burvg]]
+
[[Category: Burkholderia vietnamiensis G4]]
-
[[Category: Dephospho-CoA kinase]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
-
[[Category: Adp]]
+
-
[[Category: Atp-dependent]]
+
-
[[Category: Coa]]
+
-
[[Category: Cod]]
+
-
[[Category: National institute for allergy and infectious disease]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP

PDB ID 4i1v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools