This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4i3f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:14, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles==
==Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles==
-
<StructureSection load='4i3f' size='340' side='right' caption='[[4i3f]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
+
<StructureSection load='4i3f' size='340' side='right'caption='[[4i3f]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4i3f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cycsp Cycsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I3F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4I3F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4i3f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cycloclasticus_sp._P1 Cycloclasticus sp. P1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4I3F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Q91_2195 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=385025 CYCSP])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i3f OCA], [http://pdbe.org/4i3f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4i3f RCSB], [http://www.ebi.ac.uk/pdbsum/4i3f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4i3f ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i3f OCA], [https://pdbe.org/4i3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4i3f RCSB], [https://www.ebi.ac.uk/pdbsum/4i3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4i3f ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/K0C6T6_CYCSP K0C6T6_CYCSP]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cycsp]]
+
[[Category: Cycloclasticus sp. P1]]
-
[[Category: Alcaide, M]]
+
[[Category: Large Structures]]
-
[[Category: Cui, H]]
+
[[Category: Alcaide M]]
-
[[Category: Dong, A]]
+
[[Category: Cui H]]
-
[[Category: Ferrer, M]]
+
[[Category: Dong A]]
-
[[Category: Gertler, C]]
+
[[Category: Ferrer M]]
-
[[Category: Golyshin, P N]]
+
[[Category: Gertler C]]
-
[[Category: Savchenko, A]]
+
[[Category: Golyshin PN]]
-
[[Category: Stogios, P J]]
+
[[Category: Savchenko A]]
-
[[Category: Tornes, J]]
+
[[Category: Stogios PJ]]
-
[[Category: Xu, X]]
+
[[Category: Tornes J]]
-
[[Category: Yakimov, M M]]
+
[[Category: Xu X]]
-
[[Category: Alpha and beta protein]]
+
[[Category: Yakimov MM]]
-
[[Category: Alpha/beta hydrolase fold]]
+
-
[[Category: Alpha/beta-hydrolases superfamily]]
+
-
[[Category: Carbon-carbon bond hydrolase family]]
+
-
[[Category: Esterase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Serine hydrolase]]
+

Current revision

Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles

PDB ID 4i3f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4i3f"
Personal tools