This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4iam

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:18, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of the C139A mutant of nostoc H-NOX domain==
==Crystal Structure of the C139A mutant of nostoc H-NOX domain==
-
<StructureSection load='4iam' size='340' side='right' caption='[[4iam]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
+
<StructureSection load='4iam' size='340' side='right'caption='[[4iam]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4iam]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_7120 Anabaena 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IAM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IAM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4iam]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IAM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3l6j|3l6j]], [[2o09|2o09]], [[2o0c|2o0c]], [[2o0g|2o0g]], [[4iae|4iae]], [[4iah|4iah]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Alr2278 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=103690 Anabaena 7120])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4iam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4iam OCA], [https://pdbe.org/4iam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4iam RCSB], [https://www.ebi.ac.uk/pdbsum/4iam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4iam ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Guanylate_cyclase Guanylate cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.6.1.2 4.6.1.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4iam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4iam OCA], [http://pdbe.org/4iam PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4iam RCSB], [http://www.ebi.ac.uk/pdbsum/4iam PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4iam ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8YUQ7_NOSS1 Q8YUQ7_NOSS1]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anabaena 7120]]
+
[[Category: Large Structures]]
-
[[Category: Guanylate cyclase]]
+
[[Category: Nostoc sp. PCC 7120 = FACHB-418]]
-
[[Category: Akker, F van den]]
+
[[Category: Kumar V]]
-
[[Category: Kumar, V]]
+
[[Category: Van den Akker F]]
-
[[Category: C139a mutant]]
+
-
[[Category: Heme binding]]
+
-
[[Category: Hnox domain]]
+
-
[[Category: Lyase]]
+
-
[[Category: No binding]]
+
-
[[Category: Nostoc]]
+
-
[[Category: Soluble guanylyl cyclase]]
+

Current revision

Crystal Structure of the C139A mutant of nostoc H-NOX domain

PDB ID 4iam

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools