This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4j75

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:37, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of a parasite tRNA synthetase, product-bound==
==Crystal Structure of a parasite tRNA synthetase, product-bound==
-
<StructureSection load='4j75' size='340' side='right' caption='[[4j75]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='4j75' size='340' side='right'caption='[[4j75]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4j75]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J75 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J75 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4j75]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J75 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J75 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TYM:TRYPTOPHANYL-5AMP'>TYM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF13_0205 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TYM:TRYPTOPHANYL-5AMP'>TYM</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tryptophan--tRNA_ligase Tryptophan--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.2 6.1.1.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j75 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j75 OCA], [https://pdbe.org/4j75 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j75 RCSB], [https://www.ebi.ac.uk/pdbsum/4j75 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j75 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j75 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j75 OCA], [http://pdbe.org/4j75 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4j75 RCSB], [http://www.ebi.ac.uk/pdbsum/4j75 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4j75 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8IDW3_PLAF7 Q8IDW3_PLAF7]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 4j75" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4j75" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Plaf7]]
+
[[Category: Large Structures]]
-
[[Category: Tryptophan--tRNA ligase]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: Hol, W G.J]]
+
[[Category: Hol WGJ]]
-
[[Category: Kim, J E]]
+
[[Category: Kim JE]]
-
[[Category: Koh, C Y]]
+
[[Category: Koh CY]]
-
[[Category: Verlinde, C L.M J]]
+
[[Category: Verlinde CLMJ]]
-
[[Category: Aar]]
+
-
[[Category: Aminoacyl-trna synthetase]]
+
-
[[Category: Ligase]]
+
-
[[Category: Nucleotide binding]]
+
-
[[Category: Parasite]]
+
-
[[Category: Protein-substrate complex]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Translation]]
+
-
[[Category: Trpr]]
+

Current revision

Crystal Structure of a parasite tRNA synthetase, product-bound

PDB ID 4j75

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4j75"
Personal tools