This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4kff

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:58, 20 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 8.5==
==Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 8.5==
-
<StructureSection load='4kff' size='340' side='right' caption='[[4kff]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
<StructureSection load='4kff' size='340' side='right'caption='[[4kff]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4kff]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Ogataea_angusta Ogataea angusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KFF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KFF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4kff]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Ogataea_angusta Ogataea angusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KFF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYY:3-(4-HYDROXY-3-IMINO-6-OXO-CYCLOHEXA-1,4-DIENYL)-ALANINE'>TYY</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TYY:3-(4-HYDROXY-3-IMINO-6-OXO-CYCLOHEXA-1,4-DIENYL)-ALANINE'>TYY</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2oov|2oov]], [[4kfd|4kfd]], [[4kfe|4kfe]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kff OCA], [https://pdbe.org/4kff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kff RCSB], [https://www.ebi.ac.uk/pdbsum/4kff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kff ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=870730 Ogataea angusta])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kff OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kff RCSB], [http://www.ebi.ac.uk/pdbsum/4kff PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AMO_PICAN AMO_PICAN]
==See Also==
==See Also==
-
*[[Copper Amine Oxidase|Copper Amine Oxidase]]
+
*[[Copper amine oxidase 3D structures|Copper amine oxidase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Ogataea angusta]]
[[Category: Ogataea angusta]]
-
[[Category: Primary-amine oxidase]]
+
[[Category: Johnson BJ]]
-
[[Category: Johnson, B J]]
+
[[Category: Klema VJ]]
-
[[Category: Klema, V J]]
+
[[Category: Wilmot CM]]
-
[[Category: Wilmot, C M]]
+
[[Category: Yukl ET]]
-
[[Category: Yukl, E T]]
+
-
[[Category: Amine oxidase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxisome]]
+

Current revision

Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 8.5

PDB ID 4kff

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools