This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4n0t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:45, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4n0t' size='340' side='right'caption='[[4n0t]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4n0t' size='340' side='right'caption='[[4n0t]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4n0t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N0T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4N0T FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4n0t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N0T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4N0T FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRP24, YM8156.10C, YMR268C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4n0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n0t OCA], [http://pdbe.org/4n0t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4n0t RCSB], [http://www.ebi.ac.uk/pdbsum/4n0t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4n0t ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4n0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n0t OCA], [https://pdbe.org/4n0t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4n0t RCSB], [https://www.ebi.ac.uk/pdbsum/4n0t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4n0t ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PRP24_YEAST PRP24_YEAST]] Binds preferentially to the U4/U6 hybrid snRNAs. Can stimulate the annealing of U4 and U6. Could participate in both the formation and disassembly of the U4/U6 hybrid during splicing.
+
[https://www.uniprot.org/uniprot/PRP24_YEAST PRP24_YEAST] Binds preferentially to the U4/U6 hybrid snRNAs. Can stimulate the annealing of U4 and U6. Could participate in both the formation and disassembly of the U4/U6 hybrid during splicing.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Baker's yeast]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Andrews, K L]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Brow, D A]]
+
[[Category: Andrews KL]]
-
[[Category: Butcher, S E]]
+
[[Category: Brow DA]]
-
[[Category: Curran, E C]]
+
[[Category: Butcher SE]]
-
[[Category: Liao, H]]
+
[[Category: Curran EC]]
-
[[Category: Montemayor, E J]]
+
[[Category: Liao H]]
-
[[Category: Treba, C N]]
+
[[Category: Montemayor EJ]]
-
[[Category: Annealing u6 and u4 snrna]]
+
[[Category: Treba CN]]
-
[[Category: Nucleus]]
+
-
[[Category: Rna binding protein-rna complex]]
+
-
[[Category: Spliceosomal ribonucleoprotein complex]]
+

Current revision

Core structure of the U6 small nuclear ribonucleoprotein at 1.7 Angstrom resolution

PDB ID 4n0t

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4n0t"
Personal tools