This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ng3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4ng3" [edit=sysop:move=sysop])
Current revision (16:56, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4ng3| PDB=4ng3 | SCENE= }}
 
-
===Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid===
 
-
==About this Structure==
+
==Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid==
-
[[4ng3]] is a 8 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4l5p 4l5p]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NG3 OCA].
+
<StructureSection load='4ng3' size='340' side='right'caption='[[4ng3]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
[[Category: Almo, S C.]]
+
== Structural highlights ==
-
[[Category: Fedorov, A A.]]
+
<table><tr><td colspan='2'>[[4ng3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_paucimobilis Sphingomonas paucimobilis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4l5p 4l5p]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NG3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NG3 FirstGlance]. <br>
-
[[Category: Fedorov, E V.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.751&#8491;</td></tr>
-
[[Category: Raushel, F M.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1DF:4-HYDROXY-3-METHOXY-5-NITROBENZOIC+ACID'>1DF</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
[[Category: Vladimirova, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ng3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ng3 OCA], [https://pdbe.org/4ng3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ng3 RCSB], [https://www.ebi.ac.uk/pdbsum/4ng3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ng3 ProSAT]</span></td></tr>
-
[[Category: 4-hydroxy-3-methoxy-5-nitrobenzoic acid]]
+
</table>
-
[[Category: 5-carboxyvanillate decarboxylase]]
+
== Function ==
-
[[Category: Amidohydrolase fold]]
+
[https://www.uniprot.org/uniprot/Q8RJ47_SPHPI Q8RJ47_SPHPI]
-
[[Category: Lyase]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Sphingomonas paucimobilis]]
 +
[[Category: Almo SC]]
 +
[[Category: Fedorov AA]]
 +
[[Category: Fedorov EV]]
 +
[[Category: Raushel FM]]
 +
[[Category: Vladimirova A]]

Current revision

Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid

PDB ID 4ng3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4ng3"
Personal tools