This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4v4e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:03, 20 September 2023) (edit) (undo)
 
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4v4e]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Pelobacter_acidigallici Pelobacter acidigallici]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ti6 1ti6] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vlf 1vlf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V4E FirstGlance]. <br>
<table><tr><td colspan='2'>[[4v4e]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Pelobacter_acidigallici Pelobacter acidigallici]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ti6 1ti6] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vlf 1vlf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V4E FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4MO:MOLYBDENUM(IV)+ION'>4MO</scene>, <scene name='pdbligand=BTT:BENZENE-1,2,4,5-TETROL'>BTT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>MGD</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4MO:MOLYBDENUM(IV)+ION'>4MO</scene>, <scene name='pdbligand=BTT:BENZENE-1,2,4,5-TETROL'>BTT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>MGD</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v4e OCA], [https://pdbe.org/4v4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v4e RCSB], [https://www.ebi.ac.uk/pdbsum/4v4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v4e ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v4e OCA], [https://pdbe.org/4v4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v4e RCSB], [https://www.ebi.ac.uk/pdbsum/4v4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v4e ProSAT]</span></td></tr>
</table>
</table>

Current revision

Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici complexed with inhibitor 1,2,4,5-tetrahydroxy-benzene

PDB ID 4v4e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools